Mercurial > repos > pimarin > bedtools

annotate tool_data_table_conf.xml.sample @ 0:4cacc5b8001b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
author pimarin
date Thu, 23 Feb 2023 09:50:24 +0000
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0
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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1 <tables>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
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2 <!-- Locations of all sam indexes under genome directory -->
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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3 <table name="fasta_indexes" comment_char="#">
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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4 <columns>value, dbkey, name, path</columns>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
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5 <file path="tool-data/fasta_indexes.loc" />
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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6 </table>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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7 <!-- Locations of all gff files with annotations of genome builds -->
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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8 <table name="all_gff" comment_char="#">
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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9 <columns>value, dbkey, name, path</columns>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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10 <file path="tool-data/all_gff.loc" />
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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11 </table>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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12 <!-- Locations of dbkeys and len files under genome directory -->
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
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13 <table name="__dbkeys__" comment_char="#">
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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14 <columns>value, name, len_path</columns>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
parents:
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15 <file path="tool-data/dbkeys.loc" />
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
pimarin
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16 </table>
4cacc5b8001b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
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17 </tables>