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comparison test-data/TEST_3/TEST_3.gbff @ 3:eea334d9988b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 73af464cc860250c3fa3dd433602283ab5a44f53-dirty
author pimarin
date Thu, 22 Dec 2022 15:01:43 +0000
parents ca9e2125c5de
children 8c7499c6f32a
comparison
equal deleted inserted replaced
2:ca9e2125c5de 3:eea334d9988b
1 LOCUS contig_1 3306 bp DNA circular BCT 17-AUG-2022 1 LOCUS contig_1 1330 bp DNA circular BCT 19-DEC-2022
2 DEFINITION plasmid unnamed1, complete sequence. 2 DEFINITION plasmid unnamed1, complete sequence.
3 ACCESSION contig_1 3 ACCESSION contig_1
4 VERSION contig_1 4 VERSION contig_1
5 KEYWORDS . 5 KEYWORDS .
6 SOURCE None 6 SOURCE None
7 ORGANISM . 7 ORGANISM .
8 . 8 .
9 COMMENT Annotated with Bakta 9 COMMENT Annotated with Bakta
10 Software: v1.4.2 10 Software: v1.6.1
11 Database: v3.0 11 Database: v4.0
12 DOI: 10.1099/mgen.0.000685 12 DOI: 10.1099/mgen.0.000685
13 URL: github.com/oschwengers/bakta 13 URL: github.com/oschwengers/bakta
14 14
15 ##Genome Annotation Summary:## 15 ##Genome Annotation Summary:##
16 Annotation Date :: 08/17/2022, 09:35:50 16 Annotation Date :: 12/19/2022, 10:21:03
17 Annotation Pipeline :: Bakta 17 Annotation Pipeline :: Bakta
18 Annotation Software version :: v1.4.2 18 Annotation Software version :: v1.6.1
19 Annotation Database version :: v3.0 19 Annotation Database version :: v4.0
20 CDSs :: 0 20 CDSs :: 0
21 tRNAs :: 0 21 tRNAs :: 0
22 tmRNAs :: 0 22 tmRNAs :: 0
23 rRNAs :: 0 23 rRNAs :: 0
24 ncRNAs :: 0 24 ncRNAs :: 0
25 regulatory ncRNAs :: 0 25 regulatory ncRNAs :: 0
26 CRISPR Arrays :: 0 26 CRISPR Arrays :: 0
27 oriCs/oriVs :: 0 27 oriCs/oriVs :: 0
28 oriTs :: 0 28 oriTs :: 0
29 gaps :: 0 29 gaps :: 0
30 pseudogenes :: 0
30 FEATURES Location/Qualifiers 31 FEATURES Location/Qualifiers
31 source 1..3306 32 source 1..1330
32 /mol_type="genomic DNA" 33 /mol_type="genomic DNA"
33 /plasmid="unnamed1" 34 /plasmid="unnamed1"
34 ORIGIN 35 ORIGIN
35 1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 36 1 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc
36 61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 37 61 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc
52 1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 53 1021 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat
53 1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 54 1081 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat
54 1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 55 1141 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa
55 1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 56 1201 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc
56 1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 57 1261 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg
57 1321 cttctatttg atatttttta tcttttttca taatttcaac ctagctacgc caccatctat 58 1321 cttctatttg
58 1381 taattggcaa acggtatcga tgattgcgat tgattctaat ttgttaattg tcttcgtgtc
59 1441 agctattcct ggtttcatat gaaacaaacc atgcctgttc tcatgccagt aagtgtagca
60 1501 ttcacacaaa acttccgcta tttcaccatt tatagtttct tggtgtattt ctctgattat
61 1561 atatttgggt ttgttttcag tgaagtattc gccaaggttc tttgatgatg atggattgca
62 1621 aacatcatta agtatttgat atataaagcc ttctatggct cttaatgcag agaagcagta
63 1681 tgttgagtaa tcttccattt cgacatctat ttttttcatt attagcgagc atgatagctg
64 1741 ttttttgata tcttcatgga ttttatcgat gctttttggt agtttgctat gcaactcgga
65 1801 ctcaatagtt tcttttttta tgtcaacatt aaattcttta tttttttgtt cgacaatctc
66 1861 tttcatgttt agtattgagc acatgaaatc gttaatcaaa ctcgcgattt gaaggtattt
67 1921 tccttggaat tgaatagagc cgcgcttgta aatttttgcc ctgaccctgt caccattgct
68 1981 ggtggtcata atatattggt gtttacaatt aggatcgtta ttattatctt ctgttattgt
69 2041 tatcccctct tcagaaagaa attcaaatag atttgccctg tcatcatcac tgaattttgg
70 2101 aatggtgtat tcaaagttct ttgtgtctga atacaaacag ttttctttta taatcaaggc
71 2161 gatttcatca aagtaagtgt tattttgccc agacgctctt ccgatagtgg tatttccgcc
72 2221 tgatggcatt agttttatta agaagtctat tcctttatat gtgccagata tgtgagtttc
73 2281 tctttcgttt tttacattag aggaatagtt tgtgacgcca ttctgcgtca gagcagactc
74 2341 aatcttgtca atattgatat ttagtgcttt aaacgggttc tgtgccattg ggtcaatccg
75 2401 ttgttttttt tgaatatgta cagatcttgt ttttttgtca acggaatagc tgttcgttga
76 2461 cttgatagac cgattgattc atcatctcat aaataaagaa aaaccaccgc taccaacggt
77 2521 ggttttctca aggttcgctg agctaccaac tctttgaacc aaggtaactg gcttggagga
78 2581 gcgcagtcac caaaatctgt tctttcagtt tagccttaac aggtgcataa cttcaagaca
79 2641 aactcctcta aatcagttac caatggctgc tgccagtggc gataagtcgt gtcttaccgg
80 2701 gttggactca agacgatagt taccggataa ggcgcagcgg tcgggctgaa cggggggttc
81 2761 gtgcacacag cccagcttgg agcgaacgac ctacaccgaa ctgagatacc aacagcgtga
82 2821 gctatgagaa agcgccacgc ttcccgaagg gagaaaggcg gacaggtatc cggtaagtgg
83 2881 cagggtcgga acaggagagc gcacgaggga gcttccgggg ggaaacgcct ggtatcttta
84 2941 tagtcctgtc gggtttcgcc acctctggct tgagcgtcga tttttgtgat gctcgtcagg
85 3001 ggggcggagc ctatggaaaa acgcctgcgg tgctggcttc ttccggtgct ttgctttttg
86 3061 ctcacatgtt ctttccggct ttatcccctg attctgtgga taaccgtatt accgcctttg
87 3121 agtgagctga caccgctcgc cgcagtcgaa cgaccgagcg tagcgagtca gtgagcgagg
88 3181 aagcggaaga gcgccttatg tgacattttc tccttacgct ctgttgtgcc gttcggcatc
89 3241 ctgccctgag cgttatatct ctgtgctatt ttctacttca aagcgtgtct gtatgctgtt
90 3301 ctggag
91 // 59 //