Mercurial > repos > pimarin > abromicsextractor
view test-data/quast/quast_result.tsv @ 0:a157d29ef11d draft default tip
planemo upload commit 4b30072ce6fff8554976af6fb4fce92069d39a6e
author | pimarin |
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date | Mon, 15 May 2023 14:20:18 +0000 |
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Assembly 10_Enterococcus_faecalis_S17_L001 # contigs (>= 0 bp) 100 # contigs (>= 1000 bp) 58 # contigs (>= 5000 bp) 48 # contigs (>= 10000 bp) 41 # contigs (>= 25000 bp) 28 # contigs (>= 50000 bp) 20 Total length (>= 0 bp) 3027634 Total length (>= 1000 bp) 3015201 Total length (>= 5000 bp) 2996428 Total length (>= 10000 bp) 2944723 Total length (>= 25000 bp) 2735277 Total length (>= 50000 bp) 2421445 # contigs 62 Largest contig 436224 Total length 3017519 GC (%) 37.31 N50 99915 N90 27780 auN 154096.4 L50 8 L90 28 # total reads 3489582 # left 1744791 # right 1744791 Mapped (%) 99.85 Properly paired (%) 98.83 Avg. coverage depth 230 Coverage >= 1x (%) 100.0 # N's per 100 kbp 0.00