Mercurial > repos > pimarin > abromicsextractor
diff test-data/quast/quast_result.tsv @ 0:a157d29ef11d draft default tip
planemo upload commit 4b30072ce6fff8554976af6fb4fce92069d39a6e
author | pimarin |
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date | Mon, 15 May 2023 14:20:18 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/quast/quast_result.tsv Mon May 15 14:20:18 2023 +0000 @@ -0,0 +1,30 @@ +Assembly 10_Enterococcus_faecalis_S17_L001 +# contigs (>= 0 bp) 100 +# contigs (>= 1000 bp) 58 +# contigs (>= 5000 bp) 48 +# contigs (>= 10000 bp) 41 +# contigs (>= 25000 bp) 28 +# contigs (>= 50000 bp) 20 +Total length (>= 0 bp) 3027634 +Total length (>= 1000 bp) 3015201 +Total length (>= 5000 bp) 2996428 +Total length (>= 10000 bp) 2944723 +Total length (>= 25000 bp) 2735277 +Total length (>= 50000 bp) 2421445 +# contigs 62 +Largest contig 436224 +Total length 3017519 +GC (%) 37.31 +N50 99915 +N90 27780 +auN 154096.4 +L50 8 +L90 28 +# total reads 3489582 +# left 1744791 +# right 1744791 +Mapped (%) 99.85 +Properly paired (%) 98.83 +Avg. coverage depth 230 +Coverage >= 1x (%) 100.0 +# N's per 100 kbp 0.00