Mercurial > repos > pimarin > abromics_galaxy_json_extractor

annotate test-data/bandage/bandage_info.txt @ 0:c49ec8c0b046 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
author pimarin
date Sun, 04 Jun 2023 17:16:20 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
1 Node count: 222
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
2 Edge count: 299
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
3 Smallest edge overlap (bp): 127
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
4 Largest edge overlap (bp): 127
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
5 Total length (bp): 3042326
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
6 Total length no overlaps (bp): 3014132
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
7 Dead ends: 0
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
8 Percentage dead ends: 0%
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
9 Connected components: 2
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
10 Largest component (bp): 3042198
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
11 Total length orphaned nodes (bp): 3042198
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
12 N50 (bp): 79920
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
13 Shortest node (bp): 128
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
14 Lower quartile node (bp): 151
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
15 Median node (bp): 256
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
16 Upper quartile node (bp): 7566
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
17 Longest node (bp): 239204
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
18 Median depth: 22.997
c49ec8c0b046 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
19 Estimated sequence length (bp): 3234717