Mercurial > repos > petrn > repeatexplorer
annotate databases/0INFO.md @ 5:7e55ef6f9a05 draft
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author | petrn |
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date | Fri, 20 Dec 2019 12:45:18 +0000 |
parents | f6ebec6e235e |
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0 | 1 # DATABASE FOLDER CONTENT # |
2 | |
3 This folder contain fasta files sequence databases used for cluster annotation. | |
4 To run clustering, blast databases must be created from fasta files. This will be done automaticaly when make is run. | |
5 folder content: | |
6 dna_database.fasta - mitochondrial, plastid, rDNA genes, contaminants | |
7 protein_database.fasta - protein domains from transposable elements | |
8 tRNA_database.fasta - fragments from tRNA sequences for identification of Primer Binding Sites of transposable elements | |
9 |