Mercurial > repos > peterjc > package_mira_4_0_2

changeset 1:abd3e33f604f draft

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planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/packages/package_mira_4_0_2 commit 33c0f610472a3e19d4b85afb052c57f3f6da397f
author peterjc
date Thu, 21 May 2015 12:31:48 -0400
parents 4be5c2deb512
children 5cd8869f4075
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu May 21 10:38:17 2015 -0400
+++ b/tool_dependencies.xml	Thu May 21 12:31:48 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="MIRA" version="4.0">
+    <package name="MIRA" version="4.0.2">
         <install version="1.0">
             <actions_group>
                 <!-- Download the binaries for MIRA compatible with 64-bit OSX. -->
@@ -26,7 +26,7 @@
                     <action type="shell_command">uname</action>
                     <action type="shell_command">arch</action>
                     <action type="shell_command">echo "If pre-compiled MIRA binaries are now available for this, please report this"</action>
-                    <action type="shell_command">echo "via https://github.com/peterjc/pico_galaxyt/issues - thank you!"</action>
+                    <action type="shell_command">echo "via https://github.com/peterjc/pico_galaxy/issues - thank you!"</action>
                     <action type="shell_command">false</action>
                     <!-- The 'false' command will return an error, so Galaxy should treat this as a failed install -->
                 </actions>
@@ -47,6 +47,9 @@
 
 http://chevreux.org/projects_mira.html
 http://sourceforge.net/projects/mira-assembler/
+
+The environment variable ``$MIRA4`` will point to the folder containing the binaries,
+which is also pre-pended to the``$PATH`` variable.
         </readme>
     </package>
 </tool_dependency>