# HG changeset patch
# User peterjc
# Date 1432225908 14400
# Node ID abd3e33f604feb08430b69f4f5f8f0ca512cef4d
# Parent  4be5c2deb51202d230f8058bcfbd247a9a2c339c
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/packages/package_mira_4_0_2 commit 33c0f610472a3e19d4b85afb052c57f3f6da397f

diff -r 4be5c2deb512 -r abd3e33f604f tool_dependencies.xml
--- a/tool_dependencies.xml	Thu May 21 10:38:17 2015 -0400
+++ b/tool_dependencies.xml	Thu May 21 12:31:48 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="MIRA" version="4.0">
+    <package name="MIRA" version="4.0.2">
         <install version="1.0">
             <actions_group>
                 <!-- Download the binaries for MIRA compatible with 64-bit OSX. -->
@@ -26,7 +26,7 @@
                     <action type="shell_command">uname</action>
                     <action type="shell_command">arch</action>
                     <action type="shell_command">echo "If pre-compiled MIRA binaries are now available for this, please report this"</action>
-                    <action type="shell_command">echo "via https://github.com/peterjc/pico_galaxyt/issues - thank you!"</action>
+                    <action type="shell_command">echo "via https://github.com/peterjc/pico_galaxy/issues - thank you!"</action>
                     <action type="shell_command">false</action>
                     <!-- The 'false' command will return an error, so Galaxy should treat this as a failed install -->
                 </actions>
@@ -47,6 +47,9 @@
 
 http://chevreux.org/projects_mira.html
 http://sourceforge.net/projects/mira-assembler/
+
+The environment variable ``$MIRA4`` will point to the folder containing the binaries,
+which is also pre-pended to the``$PATH`` variable.
         </readme>
     </package>
 </tool_dependency>