Mercurial > repos > peterjc > ncbi_blast_plus
annotate test-data/tblastn_four_human_vs_rhodopsin.xml @ 48:b19b6addd05c draft default tip
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
| author | peterjc |
|---|---|
| date | Tue, 27 Jan 2015 06:06:18 -0500 |
| parents | 2f7fac29bb3c |
| children |
| rev | line source |
|---|---|
| 0 | 1 <?xml version="1.0"?> |
| 3 | 2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> |
| 0 | 3 <BlastOutput> |
| 4 <BlastOutput_program>tblastn</BlastOutput_program> | |
|
48
b19b6addd05c
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
38
diff
changeset
|
5 <BlastOutput_version>TBLASTN 2.2.30+</BlastOutput_version> |
| 0 | 6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> |
| 7 <BlastOutput_db></BlastOutput_db> | |
| 8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> | |
| 9 <BlastOutput_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</BlastOutput_query-def> | |
| 10 <BlastOutput_query-len>406</BlastOutput_query-len> | |
| 11 <BlastOutput_param> | |
| 12 <Parameters> | |
| 13 <Parameters_matrix>BLOSUM80</Parameters_matrix> | |
| 14 <Parameters_expect>1e-10</Parameters_expect> | |
| 15 <Parameters_gap-open>10</Parameters_gap-open> | |
| 16 <Parameters_gap-extend>1</Parameters_gap-extend> | |
| 17 <Parameters_filter>F</Parameters_filter> | |
| 18 </Parameters> | |
| 19 </BlastOutput_param> | |
| 33 | 20 <BlastOutput_iterations> |
| 21 <Iteration> | |
| 22 <Iteration_iter-num>1</Iteration_iter-num> | |
| 23 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
| 24 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> | |
| 25 <Iteration_query-len>406</Iteration_query-len> | |
| 26 <Iteration_hits> | |
| 27 </Iteration_hits> | |
| 28 <Iteration_stat> | |
| 29 <Statistics> | |
| 30 <Statistics_db-num>0</Statistics_db-num> | |
| 31 <Statistics_db-len>0</Statistics_db-len> | |
| 32 <Statistics_hsp-len>19</Statistics_hsp-len> | |
| 33 <Statistics_eff-space>127710</Statistics_eff-space> | |
| 34 <Statistics_kappa>0.071</Statistics_kappa> | |
| 35 <Statistics_lambda>0.299</Statistics_lambda> | |
| 36 <Statistics_entropy>0.27</Statistics_entropy> | |
| 37 </Statistics> | |
| 38 </Iteration_stat> | |
| 39 <Iteration_message>No hits found</Iteration_message> | |
| 40 </Iteration> | |
| 41 <Iteration> | |
| 42 <Iteration_iter-num>2</Iteration_iter-num> | |
| 43 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
| 44 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> | |
| 45 <Iteration_query-len>406</Iteration_query-len> | |
| 46 <Iteration_hits> | |
| 47 </Iteration_hits> | |
| 48 <Iteration_stat> | |
| 49 <Statistics> | |
| 50 <Statistics_db-num>0</Statistics_db-num> | |
| 51 <Statistics_db-len>0</Statistics_db-len> | |
| 52 <Statistics_hsp-len>19</Statistics_hsp-len> | |
| 53 <Statistics_eff-space>127710</Statistics_eff-space> | |
| 54 <Statistics_kappa>0.071</Statistics_kappa> | |
| 55 <Statistics_lambda>0.299</Statistics_lambda> | |
| 56 <Statistics_entropy>0.27</Statistics_entropy> | |
| 57 </Statistics> | |
| 58 </Iteration_stat> | |
| 59 <Iteration_message>No hits found</Iteration_message> | |
| 60 </Iteration> | |
| 61 <Iteration> | |
| 62 <Iteration_iter-num>3</Iteration_iter-num> | |
| 63 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
| 64 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> | |
| 65 <Iteration_query-len>406</Iteration_query-len> | |
| 66 <Iteration_hits> | |
| 67 </Iteration_hits> | |
| 68 <Iteration_stat> | |
| 69 <Statistics> | |
| 70 <Statistics_db-num>0</Statistics_db-num> | |
| 71 <Statistics_db-len>0</Statistics_db-len> | |
| 72 <Statistics_hsp-len>19</Statistics_hsp-len> | |
| 73 <Statistics_eff-space>127710</Statistics_eff-space> | |
| 74 <Statistics_kappa>0.071</Statistics_kappa> | |
| 75 <Statistics_lambda>0.299</Statistics_lambda> | |
| 76 <Statistics_entropy>0.27</Statistics_entropy> | |
| 77 </Statistics> | |
| 78 </Iteration_stat> | |
| 79 <Iteration_message>No hits found</Iteration_message> | |
| 80 </Iteration> | |
| 81 <Iteration> | |
| 82 <Iteration_iter-num>4</Iteration_iter-num> | |
| 83 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
| 84 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> | |
| 85 <Iteration_query-len>406</Iteration_query-len> | |
| 86 <Iteration_hits> | |
| 87 </Iteration_hits> | |
| 88 <Iteration_stat> | |
| 89 <Statistics> | |
| 90 <Statistics_db-num>0</Statistics_db-num> | |
| 91 <Statistics_db-len>0</Statistics_db-len> | |
| 92 <Statistics_hsp-len>19</Statistics_hsp-len> | |
| 93 <Statistics_eff-space>127710</Statistics_eff-space> | |
| 94 <Statistics_kappa>0.071</Statistics_kappa> | |
| 95 <Statistics_lambda>0.299</Statistics_lambda> | |
| 96 <Statistics_entropy>0.27</Statistics_entropy> | |
| 97 </Statistics> | |
| 98 </Iteration_stat> | |
| 99 <Iteration_message>No hits found</Iteration_message> | |
| 100 </Iteration> | |
| 101 <Iteration> | |
| 102 <Iteration_iter-num>5</Iteration_iter-num> | |
| 103 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
| 104 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> | |
| 105 <Iteration_query-len>406</Iteration_query-len> | |
| 106 <Iteration_hits> | |
| 107 </Iteration_hits> | |
| 108 <Iteration_stat> | |
| 109 <Statistics> | |
| 110 <Statistics_db-num>0</Statistics_db-num> | |
| 111 <Statistics_db-len>0</Statistics_db-len> | |
| 112 <Statistics_hsp-len>19</Statistics_hsp-len> | |
| 113 <Statistics_eff-space>127710</Statistics_eff-space> | |
| 114 <Statistics_kappa>0.071</Statistics_kappa> | |
| 115 <Statistics_lambda>0.299</Statistics_lambda> | |
| 116 <Statistics_entropy>0.27</Statistics_entropy> | |
| 117 </Statistics> | |
| 118 </Iteration_stat> | |
| 119 <Iteration_message>No hits found</Iteration_message> | |
| 120 </Iteration> | |
| 121 <Iteration> | |
| 122 <Iteration_iter-num>6</Iteration_iter-num> | |
| 123 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
| 124 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> | |
| 125 <Iteration_query-len>406</Iteration_query-len> | |
| 126 <Iteration_hits> | |
| 127 </Iteration_hits> | |
| 128 <Iteration_stat> | |
| 129 <Statistics> | |
| 130 <Statistics_db-num>0</Statistics_db-num> | |
| 131 <Statistics_db-len>0</Statistics_db-len> | |
| 132 <Statistics_hsp-len>19</Statistics_hsp-len> | |
| 133 <Statistics_eff-space>127710</Statistics_eff-space> | |
| 134 <Statistics_kappa>0.071</Statistics_kappa> | |
| 135 <Statistics_lambda>0.299</Statistics_lambda> | |
| 136 <Statistics_entropy>0.27</Statistics_entropy> | |
| 137 </Statistics> | |
| 138 </Iteration_stat> | |
| 139 <Iteration_message>No hits found</Iteration_message> | |
| 140 </Iteration> | |
| 141 <Iteration> | |
| 142 <Iteration_iter-num>7</Iteration_iter-num> | |
| 143 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
| 144 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> | |
| 145 <Iteration_query-len>1161</Iteration_query-len> | |
| 146 <Iteration_hits> | |
| 147 </Iteration_hits> | |
| 148 <Iteration_stat> | |
| 149 <Statistics> | |
| 150 <Statistics_db-num>0</Statistics_db-num> | |
| 151 <Statistics_db-len>0</Statistics_db-len> | |
| 152 <Statistics_hsp-len>23</Statistics_hsp-len> | |
| 153 <Statistics_eff-space>370988</Statistics_eff-space> | |
| 154 <Statistics_kappa>0.071</Statistics_kappa> | |
| 155 <Statistics_lambda>0.299</Statistics_lambda> | |
| 156 <Statistics_entropy>0.27</Statistics_entropy> | |
| 157 </Statistics> | |
| 158 </Iteration_stat> | |
| 159 <Iteration_message>No hits found</Iteration_message> | |
| 160 </Iteration> | |
| 161 <Iteration> | |
| 162 <Iteration_iter-num>8</Iteration_iter-num> | |
| 163 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
| 164 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> | |
| 165 <Iteration_query-len>1161</Iteration_query-len> | |
| 166 <Iteration_hits> | |
| 167 </Iteration_hits> | |
| 168 <Iteration_stat> | |
| 169 <Statistics> | |
| 170 <Statistics_db-num>0</Statistics_db-num> | |
| 171 <Statistics_db-len>0</Statistics_db-len> | |
| 172 <Statistics_hsp-len>23</Statistics_hsp-len> | |
| 173 <Statistics_eff-space>370988</Statistics_eff-space> | |
| 174 <Statistics_kappa>0.071</Statistics_kappa> | |
| 175 <Statistics_lambda>0.299</Statistics_lambda> | |
| 176 <Statistics_entropy>0.27</Statistics_entropy> | |
| 177 </Statistics> | |
| 178 </Iteration_stat> | |
| 179 <Iteration_message>No hits found</Iteration_message> | |
| 180 </Iteration> | |
| 181 <Iteration> | |
| 182 <Iteration_iter-num>9</Iteration_iter-num> | |
| 183 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
| 184 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> | |
| 185 <Iteration_query-len>1161</Iteration_query-len> | |
| 186 <Iteration_hits> | |
| 187 </Iteration_hits> | |
| 188 <Iteration_stat> | |
| 189 <Statistics> | |
| 190 <Statistics_db-num>0</Statistics_db-num> | |
| 191 <Statistics_db-len>0</Statistics_db-len> | |
| 192 <Statistics_hsp-len>23</Statistics_hsp-len> | |
| 193 <Statistics_eff-space>370988</Statistics_eff-space> | |
| 194 <Statistics_kappa>0.071</Statistics_kappa> | |
| 195 <Statistics_lambda>0.299</Statistics_lambda> | |
| 196 <Statistics_entropy>0.27</Statistics_entropy> | |
| 197 </Statistics> | |
| 198 </Iteration_stat> | |
| 199 <Iteration_message>No hits found</Iteration_message> | |
| 200 </Iteration> | |
| 201 <Iteration> | |
| 202 <Iteration_iter-num>10</Iteration_iter-num> | |
| 203 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
| 204 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> | |
| 205 <Iteration_query-len>1161</Iteration_query-len> | |
| 206 <Iteration_hits> | |
| 207 </Iteration_hits> | |
| 208 <Iteration_stat> | |
| 209 <Statistics> | |
| 210 <Statistics_db-num>0</Statistics_db-num> | |
| 211 <Statistics_db-len>0</Statistics_db-len> | |
| 212 <Statistics_hsp-len>23</Statistics_hsp-len> | |
| 213 <Statistics_eff-space>370988</Statistics_eff-space> | |
| 214 <Statistics_kappa>0.071</Statistics_kappa> | |
| 215 <Statistics_lambda>0.299</Statistics_lambda> | |
| 216 <Statistics_entropy>0.27</Statistics_entropy> | |
| 217 </Statistics> | |
| 218 </Iteration_stat> | |
| 219 <Iteration_message>No hits found</Iteration_message> | |
| 220 </Iteration> | |
| 221 <Iteration> | |
| 222 <Iteration_iter-num>11</Iteration_iter-num> | |
| 223 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
| 224 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> | |
| 225 <Iteration_query-len>1161</Iteration_query-len> | |
| 226 <Iteration_hits> | |
| 227 </Iteration_hits> | |
| 228 <Iteration_stat> | |
| 229 <Statistics> | |
| 230 <Statistics_db-num>0</Statistics_db-num> | |
| 231 <Statistics_db-len>0</Statistics_db-len> | |
| 232 <Statistics_hsp-len>23</Statistics_hsp-len> | |
| 233 <Statistics_eff-space>370988</Statistics_eff-space> | |
| 234 <Statistics_kappa>0.071</Statistics_kappa> | |
| 235 <Statistics_lambda>0.299</Statistics_lambda> | |
| 236 <Statistics_entropy>0.27</Statistics_entropy> | |
| 237 </Statistics> | |
| 238 </Iteration_stat> | |
| 239 <Iteration_message>No hits found</Iteration_message> | |
| 240 </Iteration> | |
| 241 <Iteration> | |
| 242 <Iteration_iter-num>12</Iteration_iter-num> | |
| 243 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
| 244 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> | |
| 245 <Iteration_query-len>1161</Iteration_query-len> | |
| 246 <Iteration_hits> | |
| 247 </Iteration_hits> | |
| 248 <Iteration_stat> | |
| 249 <Statistics> | |
| 250 <Statistics_db-num>0</Statistics_db-num> | |
| 251 <Statistics_db-len>0</Statistics_db-len> | |
| 252 <Statistics_hsp-len>23</Statistics_hsp-len> | |
| 253 <Statistics_eff-space>370988</Statistics_eff-space> | |
| 254 <Statistics_kappa>0.071</Statistics_kappa> | |
| 255 <Statistics_lambda>0.299</Statistics_lambda> | |
| 256 <Statistics_entropy>0.27</Statistics_entropy> | |
| 257 </Statistics> | |
| 258 </Iteration_stat> | |
| 259 <Iteration_message>No hits found</Iteration_message> | |
| 260 </Iteration> | |
| 261 <Iteration> | |
| 262 <Iteration_iter-num>13</Iteration_iter-num> | |
| 263 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
| 264 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> | |
| 265 <Iteration_query-len>1382</Iteration_query-len> | |
| 266 <Iteration_hits> | |
| 267 </Iteration_hits> | |
| 268 <Iteration_stat> | |
| 269 <Statistics> | |
| 270 <Statistics_db-num>0</Statistics_db-num> | |
| 271 <Statistics_db-len>0</Statistics_db-len> | |
| 272 <Statistics_hsp-len>24</Statistics_hsp-len> | |
| 273 <Statistics_eff-space>441350</Statistics_eff-space> | |
| 274 <Statistics_kappa>0.071</Statistics_kappa> | |
| 275 <Statistics_lambda>0.299</Statistics_lambda> | |
| 276 <Statistics_entropy>0.27</Statistics_entropy> | |
| 277 </Statistics> | |
| 278 </Iteration_stat> | |
| 279 <Iteration_message>No hits found</Iteration_message> | |
| 280 </Iteration> | |
| 281 <Iteration> | |
| 282 <Iteration_iter-num>14</Iteration_iter-num> | |
| 283 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
| 284 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> | |
| 285 <Iteration_query-len>1382</Iteration_query-len> | |
| 286 <Iteration_hits> | |
| 287 </Iteration_hits> | |
| 288 <Iteration_stat> | |
| 289 <Statistics> | |
| 290 <Statistics_db-num>0</Statistics_db-num> | |
| 291 <Statistics_db-len>0</Statistics_db-len> | |
| 292 <Statistics_hsp-len>24</Statistics_hsp-len> | |
| 293 <Statistics_eff-space>441350</Statistics_eff-space> | |
| 294 <Statistics_kappa>0.071</Statistics_kappa> | |
| 295 <Statistics_lambda>0.299</Statistics_lambda> | |
| 296 <Statistics_entropy>0.27</Statistics_entropy> | |
| 297 </Statistics> | |
| 298 </Iteration_stat> | |
| 299 <Iteration_message>No hits found</Iteration_message> | |
| 300 </Iteration> | |
| 301 <Iteration> | |
| 302 <Iteration_iter-num>15</Iteration_iter-num> | |
| 303 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
| 304 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> | |
| 305 <Iteration_query-len>1382</Iteration_query-len> | |
| 306 <Iteration_hits> | |
| 307 </Iteration_hits> | |
| 308 <Iteration_stat> | |
| 309 <Statistics> | |
| 310 <Statistics_db-num>0</Statistics_db-num> | |
| 311 <Statistics_db-len>0</Statistics_db-len> | |
| 312 <Statistics_hsp-len>24</Statistics_hsp-len> | |
| 313 <Statistics_eff-space>441350</Statistics_eff-space> | |
| 314 <Statistics_kappa>0.071</Statistics_kappa> | |
| 315 <Statistics_lambda>0.299</Statistics_lambda> | |
| 316 <Statistics_entropy>0.27</Statistics_entropy> | |
| 317 </Statistics> | |
| 318 </Iteration_stat> | |
| 319 <Iteration_message>No hits found</Iteration_message> | |
| 320 </Iteration> | |
| 321 <Iteration> | |
| 322 <Iteration_iter-num>16</Iteration_iter-num> | |
| 323 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
| 324 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> | |
| 325 <Iteration_query-len>1382</Iteration_query-len> | |
| 326 <Iteration_hits> | |
| 327 </Iteration_hits> | |
| 328 <Iteration_stat> | |
| 329 <Statistics> | |
| 330 <Statistics_db-num>0</Statistics_db-num> | |
| 331 <Statistics_db-len>0</Statistics_db-len> | |
| 332 <Statistics_hsp-len>24</Statistics_hsp-len> | |
| 333 <Statistics_eff-space>441350</Statistics_eff-space> | |
| 334 <Statistics_kappa>0.071</Statistics_kappa> | |
| 335 <Statistics_lambda>0.299</Statistics_lambda> | |
| 336 <Statistics_entropy>0.27</Statistics_entropy> | |
| 337 </Statistics> | |
| 338 </Iteration_stat> | |
| 339 <Iteration_message>No hits found</Iteration_message> | |
| 340 </Iteration> | |
| 341 <Iteration> | |
| 342 <Iteration_iter-num>17</Iteration_iter-num> | |
| 343 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
| 344 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> | |
| 345 <Iteration_query-len>1382</Iteration_query-len> | |
| 346 <Iteration_hits> | |
| 347 </Iteration_hits> | |
| 348 <Iteration_stat> | |
| 349 <Statistics> | |
| 350 <Statistics_db-num>0</Statistics_db-num> | |
| 351 <Statistics_db-len>0</Statistics_db-len> | |
| 352 <Statistics_hsp-len>24</Statistics_hsp-len> | |
| 353 <Statistics_eff-space>441350</Statistics_eff-space> | |
| 354 <Statistics_kappa>0.071</Statistics_kappa> | |
| 355 <Statistics_lambda>0.299</Statistics_lambda> | |
| 356 <Statistics_entropy>0.27</Statistics_entropy> | |
| 357 </Statistics> | |
| 358 </Iteration_stat> | |
| 359 <Iteration_message>No hits found</Iteration_message> | |
| 360 </Iteration> | |
| 361 <Iteration> | |
| 362 <Iteration_iter-num>18</Iteration_iter-num> | |
| 363 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
| 364 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> | |
| 365 <Iteration_query-len>1382</Iteration_query-len> | |
| 366 <Iteration_hits> | |
| 367 </Iteration_hits> | |
| 368 <Iteration_stat> | |
| 369 <Statistics> | |
| 370 <Statistics_db-num>0</Statistics_db-num> | |
| 371 <Statistics_db-len>0</Statistics_db-len> | |
| 372 <Statistics_hsp-len>24</Statistics_hsp-len> | |
| 373 <Statistics_eff-space>441350</Statistics_eff-space> | |
| 374 <Statistics_kappa>0.071</Statistics_kappa> | |
| 375 <Statistics_lambda>0.299</Statistics_lambda> | |
| 376 <Statistics_entropy>0.27</Statistics_entropy> | |
| 377 </Statistics> | |
| 378 </Iteration_stat> | |
| 379 <Iteration_message>No hits found</Iteration_message> | |
| 380 </Iteration> | |
| 381 <Iteration> | |
| 382 <Iteration_iter-num>19</Iteration_iter-num> | |
| 383 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
| 384 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> | |
| 385 <Iteration_query-len>348</Iteration_query-len> | |
| 386 <Iteration_hits> | |
| 387 <Hit> | |
| 388 <Hit_num>1</Hit_num> | |
| 389 <Hit_id>Subject_1</Hit_id> | |
| 390 <Hit_def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Hit_def> | |
| 391 <Hit_accession>Subject_1</Hit_accession> | |
| 392 <Hit_len>1047</Hit_len> | |
| 393 <Hit_hsps> | |
| 394 <Hsp> | |
| 395 <Hsp_num>1</Hsp_num> | |
| 396 <Hsp_bit-score>732.393</Hsp_bit-score> | |
| 397 <Hsp_score>1689</Hsp_score> | |
| 398 <Hsp_evalue>0</Hsp_evalue> | |
| 399 <Hsp_query-from>1</Hsp_query-from> | |
| 400 <Hsp_query-to>348</Hsp_query-to> | |
| 401 <Hsp_hit-from>1</Hsp_hit-from> | |
| 402 <Hsp_hit-to>1044</Hsp_hit-to> | |
| 403 <Hsp_query-frame>0</Hsp_query-frame> | |
| 404 <Hsp_hit-frame>1</Hsp_hit-frame> | |
| 405 <Hsp_identity>336</Hsp_identity> | |
| 406 <Hsp_positive>343</Hsp_positive> | |
| 407 <Hsp_gaps>0</Hsp_gaps> | |
| 408 <Hsp_align-len>348</Hsp_align-len> | |
| 409 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq> | |
| 410 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq> | |
| 411 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline> | |
| 412 </Hsp> | |
| 413 </Hit_hsps> | |
| 414 </Hit> | |
| 415 </Iteration_hits> | |
| 416 <Iteration_stat> | |
| 417 <Statistics> | |
| 418 <Statistics_db-num>0</Statistics_db-num> | |
| 419 <Statistics_db-len>0</Statistics_db-len> | |
| 420 <Statistics_hsp-len>18</Statistics_hsp-len> | |
| 421 <Statistics_eff-space>109230</Statistics_eff-space> | |
| 422 <Statistics_kappa>0.071</Statistics_kappa> | |
| 423 <Statistics_lambda>0.299</Statistics_lambda> | |
| 424 <Statistics_entropy>0.27</Statistics_entropy> | |
| 425 </Statistics> | |
| 426 </Iteration_stat> | |
| 427 </Iteration> | |
| 428 <Iteration> | |
| 429 <Iteration_iter-num>20</Iteration_iter-num> | |
| 430 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
| 431 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> | |
| 432 <Iteration_query-len>348</Iteration_query-len> | |
| 433 <Iteration_hits> | |
| 434 <Hit> | |
| 435 <Hit_num>1</Hit_num> | |
| 436 <Hit_id>Subject_2</Hit_id> | |
| 437 <Hit_def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Hit_def> | |
| 438 <Hit_accession>Subject_2</Hit_accession> | |
| 439 <Hit_len>1574</Hit_len> | |
| 440 <Hit_hsps> | |
| 441 <Hsp> | |
| 442 <Hsp_num>1</Hsp_num> | |
| 443 <Hsp_bit-score>646.12</Hsp_bit-score> | |
| 444 <Hsp_score>1489</Hsp_score> | |
| 445 <Hsp_evalue>0</Hsp_evalue> | |
| 446 <Hsp_query-from>1</Hsp_query-from> | |
| 447 <Hsp_query-to>341</Hsp_query-to> | |
| 448 <Hsp_hit-from>42</Hsp_hit-from> | |
| 449 <Hsp_hit-to>1067</Hsp_hit-to> | |
| 450 <Hsp_query-frame>0</Hsp_query-frame> | |
| 451 <Hsp_hit-frame>3</Hsp_hit-frame> | |
| 452 <Hsp_identity>290</Hsp_identity> | |
| 453 <Hsp_positive>320</Hsp_positive> | |
| 454 <Hsp_gaps>1</Hsp_gaps> | |
| 455 <Hsp_align-len>342</Hsp_align-len> | |
| 456 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq> | |
| 457 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq> | |
| 458 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE</Hsp_midline> | |
| 459 </Hsp> | |
| 460 </Hit_hsps> | |
| 461 </Hit> | |
| 462 </Iteration_hits> | |
| 463 <Iteration_stat> | |
| 464 <Statistics> | |
| 465 <Statistics_db-num>0</Statistics_db-num> | |
| 466 <Statistics_db-len>0</Statistics_db-len> | |
| 467 <Statistics_hsp-len>18</Statistics_hsp-len> | |
| 468 <Statistics_eff-space>109230</Statistics_eff-space> | |
| 469 <Statistics_kappa>0.071</Statistics_kappa> | |
| 470 <Statistics_lambda>0.299</Statistics_lambda> | |
| 471 <Statistics_entropy>0.27</Statistics_entropy> | |
| 472 </Statistics> | |
| 473 </Iteration_stat> | |
| 474 </Iteration> | |
| 475 <Iteration> | |
| 476 <Iteration_iter-num>21</Iteration_iter-num> | |
| 477 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
| 478 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> | |
| 479 <Iteration_query-len>348</Iteration_query-len> | |
| 480 <Iteration_hits> | |
| 481 <Hit> | |
| 482 <Hit_num>1</Hit_num> | |
| 483 <Hit_id>Subject_3</Hit_id> | |
| 484 <Hit_def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Hit_def> | |
| 485 <Hit_accession>Subject_3</Hit_accession> | |
| 486 <Hit_len>4301</Hit_len> | |
| 487 <Hit_hsps> | |
| 488 <Hsp> | |
| 489 <Hsp_num>1</Hsp_num> | |
| 490 <Hsp_bit-score>151.343</Hsp_bit-score> | |
| 491 <Hsp_score>342</Hsp_score> | |
| 492 <Hsp_evalue>1.39567e-72</Hsp_evalue> | |
| 493 <Hsp_query-from>239</Hsp_query-from> | |
| 494 <Hsp_query-to>312</Hsp_query-to> | |
| 495 <Hsp_hit-from>3147</Hsp_hit-from> | |
| 496 <Hsp_hit-to>3368</Hsp_hit-to> | |
| 497 <Hsp_query-frame>0</Hsp_query-frame> | |
| 498 <Hsp_hit-frame>3</Hsp_hit-frame> | |
| 499 <Hsp_identity>69</Hsp_identity> | |
| 500 <Hsp_positive>73</Hsp_positive> | |
| 501 <Hsp_gaps>0</Hsp_gaps> | |
| 502 <Hsp_align-len>74</Hsp_align-len> | |
| 503 <Hsp_qseq>ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_qseq> | |
| 504 <Hsp_hseq>ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_hseq> | |
| 505 <Hsp_midline>ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline> | |
| 506 </Hsp> | |
| 507 <Hsp> | |
| 508 <Hsp_num>2</Hsp_num> | |
| 509 <Hsp_bit-score>126.324</Hsp_bit-score> | |
| 510 <Hsp_score>284</Hsp_score> | |
| 511 <Hsp_evalue>1.39567e-72</Hsp_evalue> | |
| 512 <Hsp_query-from>177</Hsp_query-from> | |
| 513 <Hsp_query-to>235</Hsp_query-to> | |
| 514 <Hsp_hit-from>2855</Hsp_hit-from> | |
| 515 <Hsp_hit-to>3031</Hsp_hit-to> | |
| 516 <Hsp_query-frame>0</Hsp_query-frame> | |
| 517 <Hsp_hit-frame>2</Hsp_hit-frame> | |
| 518 <Hsp_identity>54</Hsp_identity> | |
| 519 <Hsp_positive>57</Hsp_positive> | |
| 520 <Hsp_gaps>0</Hsp_gaps> | |
| 521 <Hsp_align-len>59</Hsp_align-len> | |
| 522 <Hsp_qseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_qseq> | |
| 523 <Hsp_hseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_hseq> | |
| 524 <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +</Hsp_midline> | |
| 525 </Hsp> | |
| 526 <Hsp> | |
| 527 <Hsp_num>3</Hsp_num> | |
| 528 <Hsp_bit-score>229.42</Hsp_bit-score> | |
| 529 <Hsp_score>523</Hsp_score> | |
| 530 <Hsp_evalue>9.34154e-67</Hsp_evalue> | |
| 531 <Hsp_query-from>11</Hsp_query-from> | |
| 532 <Hsp_query-to>121</Hsp_query-to> | |
| 533 <Hsp_hit-from>1</Hsp_hit-from> | |
| 534 <Hsp_hit-to>333</Hsp_hit-to> | |
| 535 <Hsp_query-frame>0</Hsp_query-frame> | |
| 536 <Hsp_hit-frame>1</Hsp_hit-frame> | |
| 537 <Hsp_identity>107</Hsp_identity> | |
| 538 <Hsp_positive>109</Hsp_positive> | |
| 539 <Hsp_gaps>0</Hsp_gaps> | |
| 540 <Hsp_align-len>111</Hsp_align-len> | |
| 541 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq> | |
| 542 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq> | |
| 543 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline> | |
| 544 </Hsp> | |
| 545 <Hsp> | |
| 546 <Hsp_num>4</Hsp_num> | |
| 547 <Hsp_bit-score>122.873</Hsp_bit-score> | |
| 548 <Hsp_score>276</Hsp_score> | |
| 549 <Hsp_evalue>1.03783e-32</Hsp_evalue> | |
| 550 <Hsp_query-from>119</Hsp_query-from> | |
| 551 <Hsp_query-to>177</Hsp_query-to> | |
| 552 <Hsp_hit-from>1404</Hsp_hit-from> | |
| 553 <Hsp_hit-to>1580</Hsp_hit-to> | |
| 554 <Hsp_query-frame>0</Hsp_query-frame> | |
| 555 <Hsp_hit-frame>3</Hsp_hit-frame> | |
| 556 <Hsp_identity>55</Hsp_identity> | |
| 557 <Hsp_positive>56</Hsp_positive> | |
| 558 <Hsp_gaps>0</Hsp_gaps> | |
| 559 <Hsp_align-len>59</Hsp_align-len> | |
| 560 <Hsp_qseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_qseq> | |
| 561 <Hsp_hseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_hseq> | |
| 562 <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline> | |
| 563 </Hsp> | |
| 564 <Hsp> | |
| 565 <Hsp_num>5</Hsp_num> | |
| 566 <Hsp_bit-score>57.7368</Hsp_bit-score> | |
| 567 <Hsp_score>125</Hsp_score> | |
| 568 <Hsp_evalue>1.50808e-12</Hsp_evalue> | |
| 569 <Hsp_query-from>312</Hsp_query-from> | |
| 570 <Hsp_query-to>337</Hsp_query-to> | |
| 571 <Hsp_hit-from>4222</Hsp_hit-from> | |
| 572 <Hsp_hit-to>4299</Hsp_hit-to> | |
| 573 <Hsp_query-frame>0</Hsp_query-frame> | |
| 574 <Hsp_hit-frame>1</Hsp_hit-frame> | |
| 575 <Hsp_identity>23</Hsp_identity> | |
| 576 <Hsp_positive>24</Hsp_positive> | |
| 577 <Hsp_gaps>0</Hsp_gaps> | |
| 578 <Hsp_align-len>26</Hsp_align-len> | |
| 579 <Hsp_qseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_qseq> | |
| 580 <Hsp_hseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_hseq> | |
| 581 <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline> | |
| 582 </Hsp> | |
| 583 </Hit_hsps> | |
| 584 </Hit> | |
| 585 </Iteration_hits> | |
| 586 <Iteration_stat> | |
| 587 <Statistics> | |
| 588 <Statistics_db-num>0</Statistics_db-num> | |
| 589 <Statistics_db-len>0</Statistics_db-len> | |
| 590 <Statistics_hsp-len>18</Statistics_hsp-len> | |
| 591 <Statistics_eff-space>109230</Statistics_eff-space> | |
| 592 <Statistics_kappa>0.071</Statistics_kappa> | |
| 593 <Statistics_lambda>0.299</Statistics_lambda> | |
| 594 <Statistics_entropy>0.27</Statistics_entropy> | |
| 595 </Statistics> | |
| 596 </Iteration_stat> | |
| 597 </Iteration> | |
| 598 <Iteration> | |
| 599 <Iteration_iter-num>22</Iteration_iter-num> | |
| 600 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
| 601 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> | |
| 602 <Iteration_query-len>348</Iteration_query-len> | |
| 603 <Iteration_hits> | |
| 604 <Hit> | |
| 605 <Hit_num>1</Hit_num> | |
| 606 <Hit_id>Subject_4</Hit_id> | |
| 607 <Hit_def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Hit_def> | |
| 608 <Hit_accession>Subject_4</Hit_accession> | |
| 609 <Hit_len>983</Hit_len> | |
| 610 <Hit_hsps> | |
| 611 <Hsp> | |
| 612 <Hsp_num>1</Hsp_num> | |
| 613 <Hsp_bit-score>658.198</Hsp_bit-score> | |
| 614 <Hsp_score>1517</Hsp_score> | |
| 615 <Hsp_evalue>0</Hsp_evalue> | |
| 616 <Hsp_query-from>11</Hsp_query-from> | |
| 617 <Hsp_query-to>336</Hsp_query-to> | |
| 618 <Hsp_hit-from>1</Hsp_hit-from> | |
| 619 <Hsp_hit-to>978</Hsp_hit-to> | |
| 620 <Hsp_query-frame>0</Hsp_query-frame> | |
| 621 <Hsp_hit-frame>1</Hsp_hit-frame> | |
| 622 <Hsp_identity>310</Hsp_identity> | |
| 623 <Hsp_positive>322</Hsp_positive> | |
| 624 <Hsp_gaps>0</Hsp_gaps> | |
| 625 <Hsp_align-len>326</Hsp_align-len> | |
| 626 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_qseq> | |
| 627 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_hseq> | |
| 628 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline> | |
| 629 </Hsp> | |
| 630 </Hit_hsps> | |
| 631 </Hit> | |
| 632 </Iteration_hits> | |
| 633 <Iteration_stat> | |
| 634 <Statistics> | |
| 635 <Statistics_db-num>0</Statistics_db-num> | |
| 636 <Statistics_db-len>0</Statistics_db-len> | |
| 637 <Statistics_hsp-len>18</Statistics_hsp-len> | |
| 638 <Statistics_eff-space>109230</Statistics_eff-space> | |
| 639 <Statistics_kappa>0.071</Statistics_kappa> | |
| 640 <Statistics_lambda>0.299</Statistics_lambda> | |
| 641 <Statistics_entropy>0.27</Statistics_entropy> | |
| 642 </Statistics> | |
| 643 </Iteration_stat> | |
| 644 </Iteration> | |
| 645 <Iteration> | |
| 646 <Iteration_iter-num>23</Iteration_iter-num> | |
| 647 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
| 648 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> | |
| 649 <Iteration_query-len>348</Iteration_query-len> | |
| 650 <Iteration_hits> | |
| 651 <Hit> | |
| 652 <Hit_num>1</Hit_num> | |
| 653 <Hit_id>Subject_5</Hit_id> | |
| 654 <Hit_def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Hit_def> | |
| 655 <Hit_accession>Subject_5</Hit_accession> | |
| 656 <Hit_len>1047</Hit_len> | |
| 657 <Hit_hsps> | |
| 658 <Hsp> | |
| 659 <Hsp_num>1</Hsp_num> | |
| 660 <Hsp_bit-score>711.256</Hsp_bit-score> | |
| 661 <Hsp_score>1640</Hsp_score> | |
| 662 <Hsp_evalue>0</Hsp_evalue> | |
| 663 <Hsp_query-from>1</Hsp_query-from> | |
| 664 <Hsp_query-to>348</Hsp_query-to> | |
| 665 <Hsp_hit-from>1</Hsp_hit-from> | |
| 666 <Hsp_hit-to>1044</Hsp_hit-to> | |
| 667 <Hsp_query-frame>0</Hsp_query-frame> | |
| 668 <Hsp_hit-frame>1</Hsp_hit-frame> | |
| 669 <Hsp_identity>325</Hsp_identity> | |
| 670 <Hsp_positive>337</Hsp_positive> | |
| 671 <Hsp_gaps>0</Hsp_gaps> | |
| 672 <Hsp_align-len>348</Hsp_align-len> | |
| 673 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq> | |
| 674 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> | |
| 675 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline> | |
| 676 </Hsp> | |
| 677 </Hit_hsps> | |
| 678 </Hit> | |
| 679 </Iteration_hits> | |
| 680 <Iteration_stat> | |
| 681 <Statistics> | |
| 682 <Statistics_db-num>0</Statistics_db-num> | |
| 683 <Statistics_db-len>0</Statistics_db-len> | |
| 684 <Statistics_hsp-len>18</Statistics_hsp-len> | |
| 685 <Statistics_eff-space>109230</Statistics_eff-space> | |
| 686 <Statistics_kappa>0.071</Statistics_kappa> | |
| 687 <Statistics_lambda>0.299</Statistics_lambda> | |
| 688 <Statistics_entropy>0.27</Statistics_entropy> | |
| 689 </Statistics> | |
| 690 </Iteration_stat> | |
| 691 </Iteration> | |
| 692 <Iteration> | |
| 693 <Iteration_iter-num>24</Iteration_iter-num> | |
| 694 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
| 695 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> | |
| 696 <Iteration_query-len>348</Iteration_query-len> | |
| 697 <Iteration_hits> | |
| 698 <Hit> | |
| 699 <Hit_num>1</Hit_num> | |
| 700 <Hit_id>Subject_6</Hit_id> | |
| 701 <Hit_def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Hit_def> | |
| 702 <Hit_accession>Subject_6</Hit_accession> | |
| 703 <Hit_len>1344</Hit_len> | |
| 704 <Hit_hsps> | |
| 705 <Hsp> | |
| 706 <Hsp_num>1</Hsp_num> | |
| 707 <Hsp_bit-score>626.708</Hsp_bit-score> | |
| 708 <Hsp_score>1444</Hsp_score> | |
| 709 <Hsp_evalue>0</Hsp_evalue> | |
| 710 <Hsp_query-from>1</Hsp_query-from> | |
| 711 <Hsp_query-to>341</Hsp_query-to> | |
| 712 <Hsp_hit-from>23</Hsp_hit-from> | |
| 713 <Hsp_hit-to>1048</Hsp_hit-to> | |
| 714 <Hsp_query-frame>0</Hsp_query-frame> | |
| 715 <Hsp_hit-frame>2</Hsp_hit-frame> | |
| 716 <Hsp_identity>281</Hsp_identity> | |
| 717 <Hsp_positive>311</Hsp_positive> | |
| 718 <Hsp_gaps>1</Hsp_gaps> | |
| 719 <Hsp_align-len>342</Hsp_align-len> | |
| 720 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq> | |
| 721 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq> | |
| 722 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE</Hsp_midline> | |
| 723 </Hsp> | |
| 724 </Hit_hsps> | |
| 725 </Hit> | |
| 726 </Iteration_hits> | |
| 727 <Iteration_stat> | |
| 728 <Statistics> | |
| 729 <Statistics_db-num>0</Statistics_db-num> | |
| 730 <Statistics_db-len>0</Statistics_db-len> | |
| 731 <Statistics_hsp-len>18</Statistics_hsp-len> | |
| 732 <Statistics_eff-space>109230</Statistics_eff-space> | |
| 733 <Statistics_kappa>0.071</Statistics_kappa> | |
| 734 <Statistics_lambda>0.299</Statistics_lambda> | |
| 735 <Statistics_entropy>0.27</Statistics_entropy> | |
| 736 </Statistics> | |
| 737 </Iteration_stat> | |
| 738 </Iteration> | |
| 739 </BlastOutput_iterations> | |
| 740 </BlastOutput> | |
| 741 |