Mercurial > repos > peterjc > fastq_paired_unpaired

annotate test-data/rhodopsin_nucs.fasta @ 2:fae4084a0bc0 draft

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Uploaded v0.0.20, preview 5 Cope if cElementTree is missing in BLAST XML to tabular script.
author peterjc
date Thu, 02 May 2013 11:20:43 -0400
parents
children
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rev   line source
2
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
1 >gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
2 ATGAACGGGACGGAGGGCCCGAACTTCTACGTGCCCTTCTCCAACAAAACGGGTGTGGTACGCAGCCCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
3 TCGAGTACCCACAGTACTACCTGGCTGAGCCATGGCAGTTCTCCATGCTGGCCGCCTACATGTTCCTGCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
4 CATCGTGCTTGGCTTCCCCATCAACTTCCTCACGCTCTACGTCACGGTCCAGCACAAGAAGCTGCGCACG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
5 CCTCTCAACTACATCCTGCTCAACCTGGCCGTGGCTGACCTCTTCATGGTCTTCGGTGGCTTCACCACCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
6 CCCTCTACACCTCTCTGCATGGATACTTTGTCTTTGGGCCCACAGGATGCAATTTGGAGGGCTTCTTTGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
7 CACACTGGGCGGTGAAATTGCCCTGTGGTCTTTGGTGGTCCTGGCCATTGAGCGGTACGTGGTGGTGTGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
8 AAGCCCATGAGCAACTTCCGCTTTGGGGAGAACCATGCCATAATGGGCGTCGCTTTCACCTGGGTCATGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
9 CACTGGCCTGCGCTGCACCCCCCCTCGTTGGTTGGTCCAGGTACATCCCTGAAGGCATGCAGTGTTCATG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
10 CGGGATCGACTACTACACACTCAAGCCAGAAGTCAACAACGAGTCCTTTGTCATCTACATGTTCGTGGTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
11 CACTTCACCATCCCCATGATCGTCATCTTCTTTTGCTACGGGCAGCTTGTCTTCACAGTCAAGGAGGCGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
12 CAGCCCAGCAGCAGGAGTCAGCCACCACCCAGAAGGCTGAGAAGGAGGTCACTCGCATGGTCATCATCAT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
13 GGTCATTGCTTTCCTGATCTGTTGGGTGCCCTACGCCAGCGTGGCATTCTACATCTTCACCCACCAGGGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
14 TCCAACTTTGGCCCCATCTTCATGACACTCCCGGCGTTCTTCGCAAAGTCCTCCTCCATCTACAACCCTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
15 TCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACTACCCTCTGCTGTGGCAAGAACCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
16 ACTGGGTGATGACGAGGCTTCCACAACCGGTTCCAAGACGGAGACCAGCCAGGTGGCACCGGCCTAA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
17
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
18 >gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
19 TCTTTCTAGTTTGGGGGGGGGGACTTTAAAGAGCCGCCAATATGAACGGAACAGAAGGCCCAAACTTTTA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
20 CATACCCATGTCCAACAAGACTGGGGTGGTGCGAAGCCCCTTTGAATACCCTCAGTATTACCTGGCAGAG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
21 CCATGGCAATATTCCATTCTGTGCGCGTACATGTTCCTGCTCATTCTACTTGGGTTCCCAATCAACTTCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
22 TGACCTTGTACGTCACCATCCAGCACAAGAAGCTCCGGACACCCTTAAACTATATCCTGCTGAATTTGGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
23 CTTTGCCAACCACTTCATGGTCCTGTGTGGATTCACGGTGACAATGTACTCCTCAATGAACGGATACTTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
24 ATCCTCGGAGCCACCGGTTGCTATGTTGAAGGCTTCTTCGCTACCCTTGGTGGTGAAATCGCCCTTTGGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
25 CCCTGGTGGTCTTGGCCATTGAACGATACGTGGTCGTCTGTAAGCCCATGAGCAACTTCCGATTTAGTGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
26 GAACCATGCCGTCATGGGCGTAGCGTTCACCTGGATAATGGCTTTGTCCTGTGCTGTTCCTCCACTCCTT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
27 GGATGGTCCAGGTACATCCCCGAGGGCATGCAGTGCTCCTGCGGAGTCGACTACTACACCCTGAAGCCCG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
28 AGGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTCGTCCACTTCACCATCCCCCTGATTATCATTTT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
29 CTTCTGCTATGGCCGCCTGGTGTGCACTGTGAAAGAGGCTGCAGCTCAACAGCAAGAGTCCGCCACCACC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
30 CAGAAGGCCGAGAAAGAGGTGACCAGGATGGTGATCATCATGGTGGTCTTCTTCCTTATCTGTTGGGTCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
31 CCTACGCCTCTGTCGCTTTCTTCATCTTCAGCAATCAGGGCTCTGAGTTCGGCCCCATCTTCATGACCGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
32 CCCAGCTTTCTTTGCCAAGAGTTCTTCCATCTACAACCCCGTCATCTACATCATGCTCAACAAGCAGTTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
33 CGTAACTGCATGATCACCACCCTGTGCTGCGGCAAGAATCCCTTTGGAGAAGACGATGCCTCCTCTGCCG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
34 CCACCTCCAAGACAGAGGCTTCTTCTGTTTCTTCCAGCCAGGTGTCTCCTGCATAAGACCTTCCACCAGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
35 CCTGTCTCAGGGTCCGCTGCCTCACACAGCTCCCACCGCCCCAACTCCGTCTCCTGCTCGCTAAGGCGGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
36 GAAGTTCCCCTTCCATTACATAAAACGTATCTGTTCAAGAAAGGCGACGACGAAGGAGAAGAAGAGGAGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
37 CCCCCCGAACCCCTTCGCTGCTGCTGAAAACGACTTGATTGCTTCTGCAACGCAACGGGGCCTTACGGCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
38 GCGAAGGGGTTGTCATCCGGACGCGCCAAGAATTCCTTCGAGACTGTAAATATCTTAAAGGAACCGTCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
39 GCTAGTTACCGACGCCGCTCCTGTAGCCGCCGTTCCCCCGCACTCCGGCCGGTTCATACCTCTTATTTTT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
40 TTGCAATGCAACAGAAAATAATATTTTTGTTCCCACGGCTTTTCCCGGTCAGGTCTGGTAGTGGCGGAGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
41 TTGGCCGACCCCTCGCACCTGTAATAAAGCGCAG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
42
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
43 >gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
44 GTGCCCTTCTCCAACAAGACAGGCGTGGTGCGCAGTCCCTTCGAGCATCCACAGTACTACCTGGCCGAGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
45 CATGGCAGTTCTCCATGCTGGCCGCCTACATGTTTCTGCTGATCGTGCTCGGCTTCCCCATCAACTTCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
46 CACGCTCTATGTCACGGTTCAGCACAAGAAGCTGCGTACGCCTCTCAACTACATCCTGCTCAACCTGGCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
47 GTGGCCGACCTCTTCATGGTCTTCGGAGGCTTCACCACCACCCTCTACACCTCCCTGCATGGATACTTTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
48 TCTTCGGGCCTACGGGATGCAATCTGGAGGGCTTTTTTGCCACCCTGGGAGGTATGAGCTGAGATGCGGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
49 TAAGGAGGAGGCATAGAGGCATCTGGGAACAGTCCCAAGCTTGGGGTGAAGGCTAAGAGGCCTTCTTCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
50 TGTTCTGTCATTGGCGTCGTCCGAAGCCCTCACTTAATCAACAAACAGTTTGGTGGTGAGGCGCTGAGCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
51 CCATTTGGAGAGGGCAGGTATCGAGCACTGTTTTATCCCCCCTGGAGTGGTGCCATTGCCTTGCTTTACA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
52 GCAAAGAAACTGAGGATGAGAGGAGTCGAGGGTCTTGCCAGGTCACATCATGGCAGAGACAGAGCTGAGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
53 TTCAACCCTGCATCTATGTGCAGTTTCCCTTGGAGCAGCTATGTTAGGTCAGACCCACGGTGGGCACTGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
54 GGAGAGAGCTGCACAAGACAGGTCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
55 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGATTGCCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
56 GGAGTGATGTGCAGCGCAAATGTCTGAATTCCATTATTATGTGCTCCTTCTTCCTCTGAGCCAAACATCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
57 ATCTTCATGGCTCCTAGAATTGGGTCCCACCCACATGAGCAGGTCATTTTGTTTCCCTAGAGGGGAGAGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
58 TCACTGCTGTGGAGGGAGGGAAGGTTCGTCCCGCTCCATGTTTCTGTTGTCTCTGCAATGCCTTTCTCTA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
59 GGGACTCTGCCTATTGCCCCAAGAAGGACACATTCTTCTGTAAAAACTCCCTCCTGGGTTCCCAGTCTAA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
60 TCAAGACCTCTAAACTGATTTCCATGTCCCTCATGAACCCAAAGCTCTAACTGAATTAAACTTCTCAGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
61 CTTACTCCACTCTCCTCGTCCATCATGCAGCCCCTCTGCCCAGCACCCTATCTCCTCTTCTTCCCAGTGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
62 CTGAGCCCACTGTACCCTGAGACTTCGCTCCAGGCCTGCCCCAGGCTGCCTTCTCAGGTGCCCTCTCCCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
63 CATAGGAGGAGCACGGCCTCCTTAGACAGACGTGGGGTGCAGGTTGGTGGCATGCTGACTGATAGCTGAC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
64 TGCCTTGCAGGTGAAATTGCCCTGTGGTCCTTGGTGGTCCTGGCCATCGAGCGGTACGTGGTGGTATGCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
65 AGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCCTTGCCCTCACCTGGGTCATGGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
66 ACTGGCCTGCGCCGCGCCCCCGCTAGTCGGCTGGTCCAGGTAATGGCACTGAACAGAAGGGAAGTGCCTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
67 TGAGGTCTTCTTAGGGTCCCCCAGCTGGGACTCAAACCTAGGGCTGTCTGGTTCCAGGCACGGAACTGGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
68 GACTCCACTGGGGTTGGGGTTTAGGGCAAGGAAGGAGAGGATCAGACCCTAATGTTGTTACGTGGGTTGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
69 TCCGCATGTCAAGGAGAATCCAAGACACCCAATCCTTCACCTTGGCTGTGCCCCTAATCCTCATCTAAGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
70 CAGGTTCAGATTCCAATCCTCTTTGGCCCAGTGCTCCGTGGGAAGCTCCCTCTGACCTTGGGCCTCAGCG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
71 CCTGGGGTTGCTGAGCCTTCCTAGTATAGGTGGTGACATCGTAGCCCCTGGGACCTGGATCCTGCCCAGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
72 CTGCAGGCCATCATCTCCAAATGGGGCTGAGATGAGATGTGAGGAAAGAGGGGAGACAGTGGTTTGGAAA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
73 ACTGGACTGGTGGCTTTTTTGGGTTTCCAGAGGACTCATCTTCCTCTGCTTCTAGAATATTCCCACTCTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
74 TCTTCCCTTTCCTCATTCTTCCTGGGTTATTTTTTTTTCCCTTTGCTGAATTCGAGCCCCATTCCCTCCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
75 GCCTCTTTCCCTGTCTTATCTAGCCCAGTCCAGTTATATTCTCATAGGCAGAGGCAACAGATGCTCCAAA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
76 TTTTCTGAGGTCGGTTCCAACATCGCCACCCTCTAAAATCAGTGAAACATCCTAACTACATGCCTCATAG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
77 TCCTCCTGTTTCCAAAAACTGCAAAGATCTCCTGGTTACCCTGTATGCCCATCTTTGGGCTAGAAAATCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
78 TCTCACCCTGTTAATAGTAAGACCCTGGTTTGTACAAACTGCCTCAAACACAGAGTTTAGGGGCTTTTCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
79 CTTCTCTCCGCCAACCTCTGACAGGCAGAGTCTGAGGCCTGGCCTCCAGCTGCTGCGGGGAGCAGGTCTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
80 GTAAAGAATCCTGTGCAGGTCAGTGGTATACAGGTCCTGTCAGGTGACAGCCTGGGCGAGAGACTGGAAA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
81 GTATCAGGATAACACGGCTGCCAGACGAACAACAAAACAACACTGAATTCACAAGGCGCATTCGAATCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
82 CTCTCAGTCCATTTGATCCTCAGTCACACAGCCGAGTAGACACTTTATCAACTCATTTAACAGAAAGGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
83 AAGTGAAGCCCAGAGCGAGGCCAGCAACGTGGCAGGTCACTCTGGTCATCTAGGGCCTGTTCCCAACTCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
84 TTCACATGTGGGTCTCCAATATGTTCCCTCCTGTCCCAATCTCTGCCGGCCCTCAGGTACATCCCAGAGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
85 GCATGCAGTGCTCATGTGGAATCGACTACTACACCCTCAAGCCGGAGGTCAACAACGAGTCCTTTGTCAT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
86 CTACATGTTCGTGGTCCACTTCACCATCCCTATGATTGTCATATTCTTTTGCTATGGACAGCTGGTCTTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
87 ACCGTCAAGGAGGTAAGGTCATGTGTTGGGCACTGGGGACATGCACACTGAGTGAATGGAGCCCAGCTCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
88 ATTCCCAGAGTTGCCACAGTCTGGACACCTGACCTTGTGTCCCTGCAGGCAGCTGCCCAGCAGCAGGAGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
89 CAGCCACCACCCAGAAGGCCGAGAAGGAGGTCACCCGTATGGTCATCATCATGGTCATTGCTTTCCTAAT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
90 CTGTTGGCTGCCGTATGCCGGCGTGGCATTCTACATCTTCACCCACCAGGGCTCTAACTTTGGCCCCATC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
91 TTCATGACCCTCCCGGCATTCTTTGCCAAGTCGTCCTCCATCTACAACCCTGTCATCTATATCATGATGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
92 ACAAGCAGGTGCCAGGTGGTAGGGAGGGAGGGTCTGGGTCCCCCAGGCTGCAGGCACTGCCCACAGAGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
93 CAAGCCACATCCTTGACTAGGCAGACCCCAGTCTTCCCATCTGCAAAATTAGGCAGGGGAGTTCGTCTCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
94 CCCAGGCATCAGAGACATCGGGGAGAAATGCACATTTCTGGAGATGAATCAGCATCTCAGGGTGGGCCCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
95 GGAACCTGCACTTCTAAAAACCATTCCACATGACTCTGAGGCTAGCATGAGAAGTGATGATCCACATGGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
96 TCTGGAGGCCTGCTTTAAAAGTCAAGTGGTCAAAGTCCCAAGCCTGGGAACGGGATGGTGCCAGTCTCCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
97 TTAAAGAGATCAAAAGGAGCTAGAAAGTCTTGTGATGAAAGATGAAGGGATAAAGCCGTCCTTTAACACA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
98 GATCAGTGATTTCTCTGCAGAATCCATGACCCAGTGGGAAAAAGTGGTCCCTGGAGTCAGGCATATTGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
99 TTCAAATCCTAGCTCTGCTATTTTCTAGCTATGTAACCTTGGGCAAGTCATCTCCCTTCTCTGTGCTTCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
100 GTTTCTTCTTTCATAGAAAGGGTAAAATCCCAAACTCTTGGGTTAAATGAGATAACTTACATAGCCCTTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
101 ATATGCAGAGGCATTATGGAATGTCGTTAGTGACAAAGTTCCCTTGGGTTTGGTCCCTGGTATCTCTGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
102 GTGAGATTGCATATGTTCCCTTCAGAGGGTCAGATTTGGGATGAGAGTGGAGGCTGCGAGGGCCTGAGTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
103 GGAAGGGATTGGAGGCAAATCTCACCAACCATGTCAGTTTGCTACACACACTTTGGGTGGACCCTGACCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
104 TGACTCATGCTTCTTGCCTTCCAGTTCCGGAACTGCATGCTCACTACCCTCTGCTGTGGCAAGAACCCAC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
105 TGGGTGACGATGAGGCCTCCACCACTGCCTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
106
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
107 >gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
108 GTGCCCTTCTCCAACAAGACGGGTGTGGTGCGCAGCCCCTTCGAGTACCCGCAGTACTACCTGGCTGAGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
109 CCTGGCAGTTCTCCATGCTGGCTGCCTACATGTTTCTGCTGATCGTGCTCGGATTCCCCATCAACTTCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
110 CACGCTCTACGTCACCGTCCAGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
111 GTGGCCAACCTCTTCATGGTCTTTGGAGGCTTCACCACCACCCTGTATACCTCTATGCATGGATACTTCG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
112 TCTTCGGGGCCACGGGATGCAATCTGGAGGGCTTCTTTGCCACGCTGGGCGGTGAAATCGCCCTGTGGTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
113 CCTGGTGGTCCTGGCCATCGAGCGGTATGTGGTGGTCTGCAAGCCCATGAGCAACTTCCGCTTTGGGGAG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
114 AACCACGCCATCATGGGCCTCGCCTTCACGTGGGTCATGGCACTGGCCTGCGCTGCACCCCCACTAGCCG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
115 GCTGGTCCAGGTACATCCCAGAGGGCATGCAGTGCTCGTGTGGGATTGACTACTACACGCTCAAACCGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
116 GGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTGGTCCACTTCACCATCCCCATGATTGTCATTTTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
117 TTCTGCTACGGACAGCTGGTGTTCACAGTGAAGGAGGCGGCTGCCCAGCAGCAGGAGTCAGCCACCACCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
118 AGAAGGCCGAGAAGGAAGTCACGCGCATGGTCATCATCATGGTCGTTGCGTTCCTAATCTGTTGGCTGCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
119 CTACGCCAGCGTGGCATTCTACATCTTTACCCACCAGGGCTCTAACTTTGGCCCTGTCTTCATGACCATC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
120 CCGGCATTCTTCGCCAAGTCATCCTCCATCTACAACCCGGTCATCTATATCATGATGAACAAGCAGTTCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
121 GGAACTGCATGCTCACCACCCTCTGCTGTGGCAAGAACCCACTGGGTGATGACGAAGCATCCACCACTGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
122 CTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
123
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peterjc
parents:
diff changeset
124 >gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
125 ATGAACGGGACCGAGGGCCCAAACTTCTACGTGCCTTTCTCCAACAAGACGGGCGTCGTACGCAGCCCCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
126 TCGAGGCGCCGCAGTACTACCTGGCTGAGCCATGGCAGTTCAGCATGCTGGCCGCCTACATGTTCCTGCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
127 GATCATGCTTGGCTTCCCCATCAACTTCCTCACGCTGTACGTCACAGTCCAGCACAAGAAGCTGAGGACC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
128 CCCCTCAACTACATCCTGCTCAACCTGGCCGTGGCAGATCTCTTCATGGTGTTCGGGGGCTTCACCACCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
129 CCCTGTATACCTCTCTGCACGGGTACTTCGTGTTCGGTCCGACGGGCTGCAACCTCGAGGGCTTCTTTGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
130 CACCTTAGGCGGTGAAATTGCACTGTGGTCCTTGGTGGTGCTAGCCATCGAGCGGTACGTAGTGGTGTGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
131 AAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCGTCGCATTCACCTGGGTCATGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
132 CTCTGGCCTGTGCGGCCCCCCCCCTCGTCGGCTGGTCTAGATACATCCCGGAGGGGATGCAGTGCTCGTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
133 CGGGATCGATTACTACACGCCCCACGAGGAGACCAACAATGAGTCGTTCGTCATCTACATGTTCGTTGTA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
134 CACTTCATCATCCCCCTGATTGTCATATTCTTCTGCTACGGGCAGCTGGTCTTCACCGTCAAGGAGGCTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
135 CAGCCCAGCAGCAGGAGTCGGCCACCACTCAGAAGGCCGAGAAGGAGGTCACGCGTATGGTCATCATCAT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
136 GGTCATCGCTTTCCTCATATGCTGGCTGCCCTACGCAGGTGTGGCGTTCTACATCTTCACCCATCAGGGA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
137 TCCGACTTTGGCCCCATCTTCATGACCATCCCGGCTTTCTTTGCCAAGACGTCTGCCGTCTATAACCCCG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
138 TCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGGTCACCACTCTCTGCTGTGGCAAGAACCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
139 CCTAGGTGACGACGAGGCCTCCACGACCGTGTCCAAGACAGAGACCAGCCAAGTGGCCCCTGCCTAA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
140
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peterjc
parents:
diff changeset
141 >gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
142 CCGCTACTGACGAACCGCAACCATGAACGGCACTGAGGGACCTAACTTCTACATCCCCATGTCAAACGCC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
143 ACTGGTGTAGTGAGGAGTCCATTTGAATACCCGCAGTACTACCTTGCAGAACCATGGGCTTTCTCAGCTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
144 TGTCTGCCTACATGTTCTTCCTGATTATCGCCGGATTCCCCATCAACTTCCTCACCCTGTATGTCACCAT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
145 CGAACATAAGAAACTGAGGACCCCACTGAACTACATTCTGCTGAACCTGGCCGTGGCCGACCTCTTCATG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
146 GTGTTTGGCGGATTCACCACCACGATGTACACCTCCATGCACGGCTACTTTGTCTTCGGCCCCACCGGCT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
147 GCAACATCGAAGGGTTCTTCGCCACCCTCGGCGGCGAGATTGCCCTCTGGTGCCTCGTTGTCCTGGCCAT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
148 TGAAAGGTGGATGGTCGTCTGCAAGCCAGTGACCAATTTCCGCTTCGGTGAGAGCCATGCCATCATGGGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
149 GTCATGGTGACCTGGACCATGGCATTGGCCTGTGCCCTCCCCCCTCTCTTCGGCTGGTCTCGGTACATTC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
150 CGGAAGGTCTGCAGTGCTCGTGCGGGATCGACTACTATACCCGGGCGCCTGGGATCAACAATGAGTCCTT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
151 TGTGATCTACATGTTTACCTGCCACTTCTCCATCCCACTCGCCGTCATCTCTTTCTGCTACGGCCGACTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
152 GTGTGCACCGTCAAAGAGGCCGCTGCCCAGCAACAGGAGTCCGAGACCACCCAGAGGGCTGAGCGGGAGG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
153 TCACCCGCATGGTCGTCATCATGGTCATCTCCTTCCTGGTCTGCTGGGTGCCCTATGCCAGTGTGGCCTG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
154 GTACATCTTTACCCACCAGGGAAGCACTTTTGGGCCCATCTTCATGACCATTCCATCCTTCTTTGCCAAG
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
155 AGTTCAGCCCTCTACAACCCCATGATCTACATCTGCATGAACAAGCAGTTCCGCCATTGCATGATCACCA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
156 CCCTCTGCTGTGGGAAGAACCCCTTCGAGGAGGAGGATGGAGCGTCCGCCACTAGCTCTAAAACTGAGGC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
157 TTCATCCGTGTCCTCCAGCTCTGTCTCCCCGGCATAAACCTTGTTTGACCGAACACCACGCATCAACACA
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
158 AAGACCAAGAATGCTGACTAAATGCTAACATTTCAGGGAAATCCAAAGACTTTTTACTATTTTTTTACAC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
159 AACCATATAGGTTGCAAACAGAGGTTTAGCCCTGTTTACAGGTTGTCATCAATGTGATGTCAGTATGTAC
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
160 AATATAGTCAACTTGATAGCAAGTTGTTGGCTTATTTCAGATTGTATGGGCAATGTAATCAACCATATGT
fae4084a0bc0 Uploaded v0.0.20, preview 5
peterjc
parents:
diff changeset
161 GAAATAAATTGCAA