Mercurial > repos > p.lucas > varscan_readcount

changeset 3:f4f1a63fed38 draft

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Add exit code
author p.lucas
date Thu, 10 Feb 2022 08:13:56 +0000
parents 1ef844ef84aa
children 97f22e5a417d
files varscan_readcount.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/varscan_readcount.xml	Thu Feb 10 08:10:29 2022 +0000
+++ b/varscan_readcount.xml	Thu Feb 10 08:13:56 2022 +0000
@@ -5,7 +5,7 @@
         <requirement type="package" version="2.4.4">varscan</requirement>
     </requirements>
 
-    <command><![CDATA[
+    <command detect_errors="exit_code"><![CDATA[
         varscan readcounts ${input} --min-coverage ${min_cov} --min-base-qual ${min_base_qual} --output-file ${output}
     ]]></command>