# HG changeset patch
# User p.lucas
# Date 1644480836 0
# Node ID f4f1a63fed38bed0fe59c2c1bc16158ff1b80718
# Parent  1ef844ef84aa1b9dc9a73b6bc1c025754ba5e34c
Add exit code

diff -r 1ef844ef84aa -r f4f1a63fed38 varscan_readcount.xml
--- a/varscan_readcount.xml	Thu Feb 10 08:10:29 2022 +0000
+++ b/varscan_readcount.xml	Thu Feb 10 08:13:56 2022 +0000
@@ -5,7 +5,7 @@
         <requirement type="package" version="2.4.4">varscan</requirement>
     </requirements>
 
-    <command><![CDATA[
+    <command detect_errors="exit_code"><![CDATA[
         varscan readcounts ${input} --min-coverage ${min_cov} --min-base-qual ${min_base_qual} --output-file ${output}
     ]]></command>