Mercurial > repos > p.lucas > resfinder

changeset 4:6010c8988869 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded fix output name
author p.lucas
date Fri, 08 Apr 2022 09:24:00 +0000
parents a64cdbcf2407
children
files Resfinder_wrapper.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/Resfinder_wrapper.xml	Thu Apr 07 12:25:02 2022 +0000
+++ b/Resfinder_wrapper.xml	Fri Apr 08 09:24:00 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="Resfinder" name="Resfinder" version="0">
+<tool id="Resfinder" name="Resfinder" version="1">
   <description>
     Resfinder: Identifcation of acquired antibiotic resistance genes
   </description>
@@ -144,10 +144,10 @@
     <param name="t" type="text" value="0.8" area="false" label="Threshold for identity of ResFinder within the range 0-1:"/>
   </inputs> 
   <outputs>
-    <collection name="outputreport" type="list" label="${tool.name}: Report files">
+	  <collection name="outputreport" type="list" label="${tool.name} on ${on_string}: Report files">
       <discover_datasets pattern="(?P&lt;name&gt;.+)\.txt$" directory="./output" format="txt"/>
     </collection>
-    <data format="fasta" name="resistance_genes" label="${tool.name}: resistance genes"/>
+    <data format="fasta" name="resistance_genes" label="${tool.name} on ${on_string}: resistance genes"/>
   </outputs>
   <help><![CDATA[
     This tool allows to identify acquired antimicrobial resistance genes in total or partial sequenced isolates of bacteria (in FASTA format).