Mercurial > repos > mvdbeek > simple_deseq
view test-data/dge.tab.re_match.modified @ 0:d00e0214e517 draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/deseq1_no_replicate commit f95b47ed1a09ce14d3b565e8ea56d8bf12c35814-dirty
| author | mvdbeek |
|---|---|
| date | Sat, 05 Mar 2016 07:00:59 -0500 |
| parents | |
| children |
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id\ baseMean\ baseMeanA\ baseMeanB\ foldChange\ log2FoldChange\ pval\ padj NM\_175296\ 550\.2570816417.*? 23\.05706656502.*? 1077\.457096718.*? 46\.73001631321.*? 5\.546277635727.*? 2\.94263028018847e\-.*? 0\.00644436031361.*? NM\_008922\ 2761\.883903286.*? 3439\.894740391.*? 2083\.873066180.*? 0\.6057955906940.*? \-0\.7230970174259.*? 0\.3476060509664.*? .*? NM\_175370\ 5\.383653991130.*? 4\.391822202862.*? 6\.375485779399.*? 1\.451672104404.*? 0\.5377156222243.*? 0\.9900056342176.*? .*? NM\_175642\ 997\.6632218482.*? 1072\.70257304.*? 922\.6238706474.*? 0\.860092903501.*? \-0\.2174355930005.*? 0\.8136330928378.*? .*? NM\_199021\ 836\.2033056486.*? 364\.5212428375.*? 1307\.885368459.*? 3\.587953772676.*? 1\.843161302642.*? 0\.06260781985603.*? .*? NM\_001113391\ 50\.50505977373.*? 20\.86115546359.*? 80\.1489640838.*? 3\.84201940413.*? 1\.941864805360.*? 0\.5889493949408.*? .*? NM\_177834\ 1\.459761458129.*? 1\.097955550715.*? 1\.821567365542.*? 1\.659053833605.*? 0\.7303607001667.*? .*? .*? NM\_145381\ 499\.8093376553.*? 665\.3610637336.*? 334\.2576115770.*? 0\.502370261495.*? \-0\.993177030463.*? 0\.3803026440680.*? .*? NM\_001160370\ 5\.19648212318.*? 2\.195911101431.*? 8\.197053144942.*? 3\.732871125611.*? 1\.900285701609.*? 0\.9441257644198.*? .*? NM\_027974\ 2\.732351048314.*? .*? 5\.464702096628.*? I.*? I.*? 0\.9383583603144.*? .*? NM\_133235\ 40\.62435537647.*? 81\.24871075295.*? .*? .*? \-I.*? 0\.1451028914986.*? .*? NM\_028096\ 43\.18207238532.*? 84\.54257740509.*? 1\.821567365542.*? 0\.02154615368318.*? \-5\.536425840528.*? 0\.2337026153876.*? .*? NM\_201365\ 0\.5489777753577.*? 1\.097955550715.*? .*? .*? \-I.*? 0\.9989276944115.*? .*? NM\_001081198\ 82\.5947361956.*? 34\.03662207218.*? 131\.152850319.*? 3\.853286323212.*? 1\.946089391222.*? 0\.4626881575205.*? .*? NM\_001160386\ 1046\.900617607.*? 977\.1804401368.*? 1116\.620795077.*? 1\.142696629213.*? 0\.192442438003.*? 0\.8333365181725.*? .*? NM\_009418\ 602\.8071507956.*? 500\.6677311262.*? 704\.9465704650.*? 1\.40801279299.*? 0\.4936604421463.*? 0\.6418526662714.*? .*? NM\_001114663\ 363\.326119116.*? 405\.145598214.*? 321\.5066400182.*? 0\.7935582700035.*? \-0\.3335919326224.*? 0\.7925939514887.*? .*? NM\_001252070\ 400\.7927328353.*? 379\.8926205475.*? 421\.6928451231.*? 1\.110031683467.*? 0\.150600855790.*? 0\.9035028459383.*? .*? NM\_001081050\ 66\.99364755677.*? 102\.1098662165.*? 31\.87742889699.*? 0\.3121875493343.*? \-1\.679515093996.*? 0\.5724658760599.*? .*? NM\_175210\ 316\.7691319732.*? 318\.4071097075.*? 315\.13115423.*? 0\.9897114248748.*? \-0\.01492016221149.*? 0\.9935235691114.*? .*? NM\_010154\ 27\.49232338796.*? 34\.03662207218.*? 20\.94802470374.*? 0\.6154554544019.*? \-0\.7002736541631.*? 0\.9012085798320.*? .*? NM\_010472\ 904\.1619182183.*? 290\.9582209396.*? 1517\.365615497.*? 5\.215063559974.*? 2\.38268483608.*? 0\.01589910563068.*? .*? NM\_023314\ 9\.107836827713.*? .*? 18\.21567365542.*? I.*? I.*? 0\.7215338183533.*? .*? NM\_030184\ 7\.754199132031.*? 5\.489777753577.*? 10\.01862051048.*? 1\.824959216965.*? 0\.8678642239166.*? 0\.9641852475114.*? .*? NM\_011066\ 27\.42381311093.*? 43\.91822202862.*? 10\.92940419325.*? 0\.2488580750407.*? \-2\.006604893999.*? 0\.7165507948586.*? .*? NM\_145519\ 81\.3221466054.*? 35\.13457762289.*? 127\.5097155879.*? 3\.629180261011.*? 1\.859643717111.*? 0\.4857824359773.*? .*? NM\_173760\ 7561\.917651204.*? 8833\.052405506.*? 6290\.782896901.*? 0\.7121867513182.*? \-0\.4896724971324.*? 0\.4881835229882.*? .*? NM\_019933\ 93\.21338135454.*? 137\.2444438394.*? 49\.18231886965.*? 0\.3583556280587.*? \-1\.48053608233.*? 0\.5440051342165.*? .*? NM\_181750\ 1546\.771748845.*? 1589\.839637436.*? 1503\.703860255.*? 0\.9458210909123.*? \-0\.08036078200322.*? 0\.9240876583581.*? .*? NM\_028320\ 57\.13040656345.*? 50\.50595533291.*? 63\.75485779399.*? 1\.262323569047.*? 0\.3360817610546.*? 0\.9221967711388.*? .*? NM\_021605\ 865\.8593000076.*? 867\.3848850652.*? 864\.3337149500.*? 0\.9964823342350.*? \-0\.005083865876637.*? 0\.9969276715460.*? .*? NM\_173437\ 1223\.229502818.*? 1416\.362660423.*? 1030\.096345214.*? 0\.7272829014757.*? \-0\.4594114361540.*? 0\.6012428498974.*? .*? NM\_001287179\ 2446\.112872015.*? 2561\.530299819.*? 2330\.695444211.*? 0\.9098840034710.*? \-0\.1362454597780.*? 0\.8613334169860.*? .*? NM\_001081290\ 2571\.06218391.*? 3434\.404962638.*? 1707\.719405196.*? 0\.4972388008327.*? \-1\.007989216870.*? 0\.1964229760215.*? .*? NM\_013862\ 150\.8417188202.*? 86\.73848850652.*? 214\.9449491340.*? 2\.478080409688.*? 1\.309223001351.*? 0\.4875874243431.*? .*? NM\_023041\ 1\.459761458129.*? 1\.097955550715.*? 1\.821567365542.*? 1\.659053833605.*? 0\.7303607001667.*? .*? .*? NM\_022563\ 449\.17800403.*? 509\.4513755320.*? 388\.9046325433.*? 0\.7633792962817.*? \-0\.3895280353403.*? 0\.7393210567613.*? .*? NM\_026626\ 17\.01831103609.*? 34\.03662207218.*? .*? .*? \-I.*? 0\.4813033562414.*? .*? NM\_027188\ 299\.6321593461.*? 272\.2929765774.*? 326\.9713421149.*? 1\.200807109403.*? 0\.2640044236028.*? 0\.8483974717297.*? .*? NM\_001243792\ 0\.4553918413856.*? .*? 0\.9107836827713.*? I.*? I.*? .*? .*? NM\_133684\ 2694\.508299740.*? 3210\.422030292.*? 2178\.594569189.*? 0\.6786006788617.*? \-0\.5593652215876.*? 0\.4680115747844.*? .*? NM\_001011874\ 61\.06101579028.*? 96\.62008846296.*? 25\.50194311759.*? 0\.2639403826190.*? \-1\.921715996412.*? 0\.5441433178275.*? .*? NM\_001159751\ 1\.646933326073.*? 3\.293866652146.*? .*? .*? \-I.*? 0\.9693285663746.*? .*? NM\_001195662\ 0\.4553918413856.*? .*? 0\.9107836827713.*? I.*? I.*? .*? .*? NM\_133826\ 2492\.574482106.*? 2486\.869322370.*? 2498\.279641841.*? 1\.004588226397.*? 0\.006604272081398.*? 0\.9940022403201.*? .*? NR\_015470\ 132\.8566516528.*? 68\.07324414436.*? 197\.6400591613.*? 2\.903344208809.*? 1\.537715622224.*? 0\.4467536460012.*? .*? NM\_145692\ 3\.830306599029.*? 2\.195911101431.*? 5\.464702096628.*? 2\.488580750407.*? 1\.315323200887.*? 0\.9756462227571.*? .*? NM\_026493\ 24\.86609610209.*? 40\.62435537647.*? 9\.107836827713.*? 0\.2241964640007.*? \-2\.157164570574.*? 0\.7181218971230.*? .*? NM\_001033636\ 11\.04806578417.*? 12\.07751105787.*? 10\.01862051048.*? 0\.829526916802.*? \-0\.2696392998332.*? 0\.9897028312534.*? .*? NM\_001081209\ 0\.9107836827713.*? .*? 1\.821567365542.*? I.*? I.*? 0\.9917870143605.*? .*? NM\_172841\ 298\.5633094687.*? 83\.44462185438.*? 513\.6819970830.*? 6\.155962908903.*? 2\.621984539121.*? 0\.06864435212632.*? .*? NM\_008678\ 1\.553347392101.*? 2\.195911101431.*? 0\.9107836827713.*? 0\.4147634584013.*? \-1\.269639299833.*? 0\.9968426910602.*? .*? NM\_010164\ 11\.14165171815.*? 13\.17546660858.*? 9\.107836827713.*? 0\.6912724306688.*? \-0\.5326737056670.*? 0\.9700444148822.*? .*? NM\_001098528\ 59\.08317334839.*? 68\.07324414436.*? 50\.09310255242.*? 0\.7358706520023.*? \-0\.4424758966954.*? 0\.8925974400355.*? .*? NM\_025303\ 4\.928262149745.*? 4\.391822202862.*? 5\.464702096628.*? 1\.244290375203.*? 0\.3153232008878.*? 0\.9994679665835.*? .*? NM\_133832\ 6248\.340556396.*? 8055\.699875600.*? 4440\.981237193.*? 0\.5512843459628.*? \-0\.8591314590349.*? 0\.2311044473430.*? .*? NM\_001033288\ 11\.87780136145.*? 16\.46933326073.*? 7\.286269462171.*? 0\.4424143556280.*? \-1\.17652989544.*? 0\.9183863104454.*? .*? NM\_026456\ 2308\.548265770.*? 2106\.976701823.*? 2510\.119829717.*? 1\.191337249978.*? 0\.2525818766756.*? 0\.7481616213662.*? .*? NM\_020604\ 31\.5098018549.*? 38\.42844427504.*? 24\.59115943482.*? 0\.6399207643905.*? \-0\.644034814614.*? 0\.8991958572706.*? .*? NR\_130314\ 4\.298236268890.*? 7\.685688855008.*? 0\.9107836827713.*? 0\.1185038452575.*? \-3\.076994221890.*? 0\.9258492809635.*? .*? NM\_153154\ 12\.58887534780.*? 8\.783644405724.*? 16\.3941062898.*? 1\.866435562805.*? 0\.900285701609.*? 0\.9364687128395.*? .*? NM\_153179\ 75\.67027264087.*? 32\.93866652146.*? 118\.401878760.*? 3\.594616639477.*? 1\.845837917586.*? 0\.5071415105559.*? .*? NM\_028534\ 21\.64073972697.*? 24\.15502211574.*? 19\.12645733819.*? 0\.7918211478570.*? \-0\.3367534956918.*? 0\.9653449966122.*? .*? NM\_007733\ 188\.4462486527.*? 121\.8730661294.*? 255\.0194311759.*? 2\.092500330673.*? 1\.065227850761.*? 0\.5275558542890.*? .*? NM\_026719\ 857\.7101592786.*? 1247\.277505612.*? 468\.1428129444.*? 0\.3753317211589.*? \-1\.413761870144.*? 0\.1454356086529.*? .*? NM\_177235\ 42\.73250167858.*? 47\.21208868076.*? 38\.25291467639.*? 0\.8102355931560.*? \-0\.3035866317566.*? 0\.9434924018471.*? .*? NM\_001276764\ 16\.59381598630.*? 7\.685688855008.*? 25\.50194311759.*? 3\.318107667210.*? 1\.730360700166.*? 0\.8364559005045.*? .*? NM\_183019\ 5\.851583660991.*? 9\.881599956.*? 1\.821567365542.*? 0\.1843393148450.*? \-2\.439564301275.*? 0\.9153295421815.*? .*? NM\_001277076\ 37\.55437851852.*? 13\.17546660858.*? 61\.93329042845.*? 4\.700652528548.*? 2\.23286104069.*? 0\.6143112516829.*? .*? NM\_198006\ 910\.7375614737.*? 897\.0296849346.*? 924\.4454380129.*? 1\.030562815856.*? 0\.04343244409357.*? 0\.9646366844406.*? .*? NM\_018872\ 2780\.437202751.*? 3507\.96798453.*? 2052\.906420966.*? 0\.58521241642.*? \-0\.7729677154954.*? 0\.3153032576833.*? .*? NM\_001290814\ 159\.4247579704.*? 16\.46933326073.*? 302\.38018268.*? 18\.36019575856.*? 4\.198509535905.*? 0\.04044345071971.*? .*? NM\_019570\ 699\.4482848992.*? 902\.5194626881.*? 496\.3771071104.*? 0\.5499904740357.*? \-0\.8625214638506.*? 0\.3960912000720.*? .*? NM\_001290720\ 1\.097955550715.*? 2\.195911101431.*? .*? .*? \-I.*? 0\.9854804392497.*? .*? NR\_110976\ 33\.41241732597.*? 34\.03662207218.*? 32\.78821257976.*? 0\.9633215808030.*? \-0\.05391060877784.*? 0\.9979946668479.*? .*? NM\_008719\ 476\.789884575.*? 635\.7162638643.*? 317\.8635052872.*? 0\.5000084524423.*? \-0\.9999756116128.*? 0\.3847767777620.*? .*? NM\_018775\ 9570\.270003126.*? 9902\.46111190.*? 9238\.078894350.*? 0\.932907364134.*? \-0\.1001942634769.*? 0\.8857077235475.*? .*? NM\_145142\ 53\.50652635467.*? 98\.81599956.*? 8\.197053144942.*? 0\.0829526916802.*? \-3\.591567394720.*? 0\.3249120767254.*? .*? NM\_001252201\ 0\.5489777753577.*? 1\.097955550715.*? .*? .*? \-I.*? 0\.9989276944115.*? .*? NM\_001033289\ 0\.9107836827713.*? .*? 1\.821567365542.*? I.*? I.*? 0\.9917870143605.*? .*? NR\_027826\ 5\.920093938014.*? .*? 11\.8401878760.*? I.*? I.*? 0\.8288509502493.*? .*? NM\_001013025\ 2059\.451167430.*? 1749\.043192289.*? 2369\.859142571.*? 1\.354946037363.*? 0\.4382353953592.*? 0\.5837531176141.*? .*? NM\_023645\ 1544\.108355854.*? 2178\.343812619.*? 909\.8728990886.*? 0\.4176902166763.*? \-1\.259494742427.*? 0\.13793742683.*? .*? NM\_028450\ 145\.3846289766.*? 209\.7095101866.*? 81\.05974776665.*? 0\.3865334847928.*? \-1\.371334696902.*? 0\.4750762544373.*? .*? NM\_028599\ 2480\.050087019.*? 2665\.836077137.*? 2294\.264096901.*? 0\.8606170936679.*? \-0\.2165565993547.*? 0\.7807133894013.*? .*? NM\_019790\ 67\.030365483.*? 38\.42844427504.*? 95\.63228669099.*? 2\.488580750407.*? 1\.315323200887.*? 0\.6576144168503.*? .*? NM\_153556\ 500\.8060950191.*? 543\.48799760.*? 458\.1241924340.*? 0\.8429334124277.*? \-0\.2465094249947.*? 0\.8273407156769.*? .*? NM\_030025\ 37\.86021197738.*? 27\.44888876788.*? 48\.27153518688.*? 1\.758597063621.*? 0\.8144249649551.*? 0\.8528886444879.*? .*? NM\_001001883\ 109\.7628671616.*? 85\.64053295581.*? 133\.8852013673.*? 1\.563339189358.*? 0\.6446308261408.*? 0\.7720822016674.*? .*? NM\_001081433\ 16889\.26051093.*? 15057\.36242251.*? 18721\.15859936.*? 1\.243322573638.*? 0\.3142006447521.*? 0\.6466911371970.*? .*? NM\_031179\ 25279\.92011651.*? 31476\.18972791.*? 19083\.65050510.*? 0\.6062884570868.*? \-0\.7219237391517.*? 0\.289873392683.*? .*? NM\_139146\ 279\.4086420164.*? 350\.2478206782.*? 208\.5694633546.*? 0\.5954911095542.*? \-0\.7478481255012.*? 0\.5952474251785.*? .*? NM\_199007\ 90\.03817629332.*? 142\.7342215930.*? 37\.34213099362.*? 0\.2616200276069.*? \-1\.934455108243.*? 0\.4416638297933.*? .*? NM\_025824\ 1603\.11182443.*? 1812\.724614231.*? 1393\.499034640.*? 0\.7687317884360.*? \-0\.3794477671665.*? 0\.6487128453791.*? .*? NM\_172513\ 5979\.501751563.*? 5115\.374910783.*? 6843\.62859234.*? 1\.337854744119.*? 0\.4199214857000.*? 0\.5576410431923.*? .*? NM\_001013771\ 71\.06709847229.*? 91\.13031070939.*? 51\.00388623519.*? 0\.5596808113367.*? \-0\.8373238091226.*? 0\.769147786399.*? .*? NM\_001033373\ 447\.5010694792.*? 612\.659197299.*? 282\.342941659.*? 0\.4608482871125.*? \-1\.117636206388.*? 0\.3430282342123.*? .*? NM\_172406\ 162\.506377097.*? 9\.881599956.*? 315\.13115423.*? 31\.89070146818.*? 4\.995063926361.*? 0\.01833756706527.*? .*? NM\_175200\ 27\.23664124299.*? 41\.72231092719.*? 12\.75097155879.*? 0\.3056151798746.*? \-1\.710211891219.*? 0\.7573902978974.*? .*? NM\_001045513\ 576\.5815958632.*? 502\.8636422277.*? 650\.299549498.*? 1\.293192617024.*? 0\.3709371760988.*? 0\.7306440837246.*? .*? NM\_173444\ 429\.5460035442.*? 487\.4922645177.*? 371\.5997425707.*? 0\.7622679776023.*? \-0\.3916298242118.*? 0\.7420089251762.*? .*? NM\_007561\ 3448\.344341224.*? 3800\.024161026.*? 3096\.664521422.*? 0\.8149065348537.*? \-0\.2952934949736.*? 0\.6931079413707.*? .*? NM\_030013\ 254\.4028386827.*? 88\.934399607.*? 419\.8712777576.*? 4\.721134674642.*? 2\.239133637711.*? 0\.1401405505785.*? .*? NM\_001037725\ 6935\.435498011.*? 7696\.668410516.*? 6174\.202585507.*? 0\.8021915790306.*? \-0\.3179812732805.*? 0\.6537031037450.*? .*? NR\_045915\ 21\.7217878324.*? 19\.763199912.*? 23\.68037575205.*? 1\.198205546492.*? 0\.2608754168654.*? 0\.9753874538974.*? .*? NR\_045914\ 0\.9107836827713.*? .*? 1\.821567365542.*? I.*? I.*? 0\.9917870143605.*? .*? NM\_011780\ 0\.9107836827713.*? .*? 1\.821567365542.*? I.*? I.*? 0\.9917870143605.*? .*? NM\_001097644\ 6047\.887098081.*? 9176\.712492880.*? 2919\.061703282.*? 0\.3180944925044.*? \-1\.652472701649.*? 0\.0239554652307.*? .*? NM\_001039493\ 1584\.664648733.*? 1751\.239103391.*? 1418\.090194075.*? 0\.8097638930794.*? \-0\.3044267794064.*? 0\.7153144322679.*? .*? NM\_033563\ 3664\.441427239.*? 4743\.16797909.*? 2585\.714875387.*? 0\.5451451196302.*? \-0\.8752877631597.*? 0\.242041365028.*? .*? 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