Mercurial > repos > mvdbeek > repeat_element_identifier

annotate repeat_element_identifier_tool.xml @ 4:643eb09c9975 draft default tip

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planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
author mvdbeek
date Wed, 11 May 2016 13:27:47 -0400
parents 9b5d67bce66a
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
1 <tool id="repeat_element_identifier" name="repeat_element_identifier" version="0.0.1" hidden="false" >
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9b5d67bce66a planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 2
diff changeset
2 <command>
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
3 #for i in $rep
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
4 echo "$i.input_file.element_identifier" > "$output"
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
5 #end for
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
6 </command>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
7 <inputs>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
8 <repeat name="rep" title="input">
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862f0f5bfab7 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 1
diff changeset
9 <param name="input_file" type="data"/>
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
10 </repeat>
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b6eba97ffa0e planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 0
diff changeset
11 </inputs>
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
12 <outputs>
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643eb09c9975 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 3
diff changeset
13 <data name="output" format="txt" />
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
14 </outputs>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
15 <help>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
16 This tool will print the element identifier of files in a repeat section.
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
17 </help>
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b6eba97ffa0e planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 0
diff changeset
18 </tool>