Mercurial > repos > mvdbeek > package_r_cairo

changeset 0:46a5f0a98c47 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_cairo_1_5_9 commit b07fb0cfe8300ce810ba76417deeda88680e828f-dirty
author mvdbeek
date Thu, 08 Oct 2015 12:16:15 -0400
parents
children fda6e39880ae
files tool_dependencies.xml
diffstat 1 files changed, 37 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Oct 08 12:16:15 2015 -0400
@@ -0,0 +1,37 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.2.1">
+        <repository changeset_revision="7a8da81f6a9f" name="package_r_3_2_2" owner="mvdbeek" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="libxml2" version="2.9.1">
+        <repository changeset_revision="df7589f53a88" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="cairo" version="1.12.14">
+        <repository changeset_revision="ee2eb3c816f9" name="package_cairo_1_12_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="r_cairo" version="1.5.9">
+        <install version="1.0">
+            <actions>
+                <action type="setup_r_environment">
+                    <repository changeset_revision="7a8da81f6a9f" name="package_r_3_2_2" owner="mvdbeek" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.2.2" />
+                    </repository>
+                    <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
+                    <repository changeset_revision="df7589f53a88" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="libxml2" version="2.9.1" />
+                    </repository>
+                    <repository changeset_revision="ee2eb3c816f9" name="package_cairo_1_12_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="cairo" version="1.12.14" />
+                    </repository>
+                    <package>https://cran.r-project.org/src/contrib/Cairo_1.5-9.tar.gz</package>
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="set_to" name="R_CAIRO_ROOT_PATH">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+          Package for R Cairo package.
+        </readme>
+    </package>
+</tool_dependency>