Mercurial > repos > mvdbeek > package_r_3_2_1_goseq_1_22_0

changeset 4:87ad927c51b2 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/packages/package_r_3_2_1_goseq_1_22_0 commit f95b47ed1a09ce14d3b565e8ea56d8bf12c35814-dirty
author mvdbeek
date Fri, 04 Mar 2016 06:01:44 -0500
parents 6aec352282a6
children 4f43af0c6b44
files tool_dependencies.xml
diffstat 1 files changed, 6 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Sun Feb 28 11:51:55 2016 -0500
+++ b/tool_dependencies.xml	Fri Mar 04 06:01:44 2016 -0500
@@ -3,8 +3,8 @@
     <package name="R" version="3.2.1">
         <repository changeset_revision="9f31a291b305" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="libxml2" version="2.9.1">
-        <repository changeset_revision="492a5c665b59" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="libxml2" version="2.9.3">
+        <repository changeset_revision="47936cf745d0" name="package_libxml2_2_9_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
      <package name="libcurl" version="7.35">
         <repository changeset_revision="8d4b20e45bd1" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
@@ -17,8 +17,8 @@
                         <package name="R" version="3.2.1" />
                     </repository>
                     <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
-                    <repository changeset_revision="492a5c665b59" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="libxml2" version="2.9.1" />
+                    <repository changeset_revision="47936cf745d0" name="package_libxml2_2_9_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="libxml2" version="2.9.3" />
                     </repository>
                      <repository changeset_revision="8d4b20e45bd1" name="package_libcurl_7_35" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="libcurl" version="7.35" />
@@ -64,6 +64,8 @@
                         <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/geneLenDataBase_1.6.0.tar.gz?raw=true</package>
                         <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/GO.db_3.2.2.tar.gz?raw=true</package>
                         <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/org.Hs.eg.db_3.2.3.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/chron_2.3-47.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/data.table_1.9.6.tar.gz?raw=true</package>
                         <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/goseq_1.22.0.tar.gz?raw=true</package>
                 </action>
             </actions>