Mercurial > repos > mvdbeek > package_ngs_1_1_3

comparison tool_dependencies.xml @ 1:d8ab6092efeb draft

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planemo upload commit 96ecd86165525684766848f98a1c3be4353ec3b1-dirty
author mvdbeek
date Sat, 15 Aug 2015 09:45:03 -0400
parents f090c319428b
children ec5356060e00
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0:f090c319428b 1:d8ab6092efeb
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="ncbi_vdb" version="2.5.2"> 3 <!-- <package name="ncbi_vdb" version="2.5.2">
4 <repository changeset_revision="a3f02a928f5e" name="package_ncbi_vdb_2_5_2" owner="mvdbeek" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository name="package_ncbi_vdb_2_5_2" owner="mvdbeek" prior_installation_required="True" />
5 </package> 5 </package>
6 -->
6 <package name="ngs" version="1.1.3"> 7 <package name="ngs" version="1.1.3">
7 <install version="1.0"> 8 <install version="1.0">
8 <actions> 9 <actions>
9 <action target_filename="ngs-1.1.3.tar.gz" type="download_by_url">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action> 10 <action type="download_by_url" target_filename="ngs-1.1.3.tar.gz">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action>
10 <action type="autoconf" /> 11 <action type="autoconf">--prefix=$INSTALL_DIR --build=$INSTALL_DIR</action>
11 <action type="set_environment"> 12 <action type="set_environment">
12 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
13 </action> 14 </action>
14 </actions> 15 </actions>
15 </install> 16 </install>
16 <readme> 17 <readme>
17 ncbi-ngs, required for sra-tools package. 18 ncbi-ngs, required for sra-tools package.