Mercurial > repos > mvdbeek > igv_take_screenshots

annotate test-data/igv_session.xml @ 34:fbba13c34eb8 draft default tip

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"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c6f25b122899a00695b5ca9e70d34e2c1d288236-dirty"
author mvdbeek
date Mon, 03 Feb 2020 09:40:58 +0000
parents 474837e086cc
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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1 <?xml version="1.0" encoding="UTF-8" standalone="no"?>
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474837e086cc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit cfa400e89cb4bb8de9ca2ca75ee2e50b77c9a610
mvdbeek
parents: 13
diff changeset
2 <Session genome="dm6" hasGeneTrack="true" hasSequenceTrack="true" version="8">
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1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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3 <Resources>
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474837e086cc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit cfa400e89cb4bb8de9ca2ca75ee2e50b77c9a610
mvdbeek
parents: 13
diff changeset
4 <Resource path="http://localhost:8080/display_application/d836242eec778a25/igv_bam/local_default/None/data/galaxy_d836242eec778a25.bam"/>
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1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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5 </Resources>
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474837e086cc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit cfa400e89cb4bb8de9ca2ca75ee2e50b77c9a610
mvdbeek
parents: 13
diff changeset
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474837e086cc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit cfa400e89cb4bb8de9ca2ca75ee2e50b77c9a610
mvdbeek
parents: 13
diff changeset
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1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
diff changeset
8 <Panel height="300" name="Panelrover_corrected.bam" width="1920">
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474837e086cc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit cfa400e89cb4bb8de9ca2ca75ee2e50b77c9a610
mvdbeek
parents: 13
diff changeset
9 <Track altColor="0,0,178" autoScale="true" color="175,175,175" colorScale="ContinuousColorScale;0.0;10.0;255,255,255;175,175,175" displayMode="COLLAPSED" featureVisibilityWindow="-1" fontSize="10" id="http://localhost:8080/display_application/d836242eec778a25/igv_bam/local_default/None/data/galaxy_d836242eec778a25.bam_coverage" name="rover_corrected.bam Coverage" showReference="false" snpThreshold="0.2" sortable="true" visible="true">
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1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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10 <DataRange baseline="0.0" drawBaseline="true" flipAxis="false" maximum="10.0" minimum="0.0" type="LINEAR"/>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
diff changeset
11 </Track>
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474837e086cc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit cfa400e89cb4bb8de9ca2ca75ee2e50b77c9a610
mvdbeek
parents: 13
diff changeset
12 <Track altColor="0,0,178" autoScale="false" color="0,0,178" displayMode="EXPANDED" featureVisibilityWindow="-1" fontSize="10" id="http://localhost:8080/display_application/d836242eec778a25/igv_bam/local_default/None/data/galaxy_d836242eec778a25.bam" name="rover_corrected.bam" sortable="true" visible="true">
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1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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13 <RenderOptions colorByTag="CD" colorOption="TAG" flagUnmappedPairs="false" groupByOption="NONE" groupByTag="BR" linkByTag="READNAME" linkedReads="false" maxInsertSize="1000" minInsertSize="50" quickConsensusMode="false" shadeBasesOption="QUALITY" shadeCenters="true" showAllBases="false" sortByTag="" viewPairs="false"/>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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14 </Track>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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15 </Panel>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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16 <Panel height="186" name="FeaturePanel" width="1920">
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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17 <Track altColor="0,0,178" autoScale="false" color="0,0,178" displayMode="COLLAPSED" featureVisibilityWindow="-1" fontSize="10" id="Reference sequence" name="Reference sequence" sortable="false" visible="true"/>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
diff changeset
18 </Panel>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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19 <PanelLayout dividerFractions="0.004995836802664446,0.12905911740216486,0.2681099084096586,0.5512073272273106,0.8409658617818485"/>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
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20 </Session>
1100d5a77c4d planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
mvdbeek
parents:
diff changeset
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