Mercurial > repos > mvdbeek > igv_take_screenshots

diff test-data/igv_session.xml @ 13:1100d5a77c4d draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1ddb87e95baeea2a4ee9b95930da6e0927fb7ff7-dirty
author mvdbeek
date Fri, 28 Jul 2017 12:47:05 -0400
parents
children 474837e086cc
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/igv_session.xml	Fri Jul 28 12:47:05 2017 -0400
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+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<Session genome="/Users/mvandenb/src/galaxy/database/jobs_directory/000/350/working/genome.fa" hasGeneTrack="false" hasSequenceTrack="true" version="8">
+    <Resources>
+        <Resource path="/Users/mvandenb/src/galaxy/database/jobs_directory/000/350/working/0.rover_corrected.bam.bam"/>
+    </Resources>
+            <Panel height="300" name="Panelrover_corrected.bam" width="1920">
+            <Track altColor="0,0,178" autoScale="true" color="175,175,175" colorScale="ContinuousColorScale;0.0;10.0;255,255,255;175,175,175" displayMode="COLLAPSED" featureVisibilityWindow="-1" fontSize="10" id="0.rover_corrected.bam.bam_coverage" name="rover_corrected.bam Coverage" showReference="false" snpThreshold="0.2" sortable="true" visible="true">
+                <DataRange baseline="0.0" drawBaseline="true" flipAxis="false" maximum="10.0" minimum="0.0" type="LINEAR"/>
+            </Track>
+            <Track altColor="0,0,178" autoScale="false" color="0,0,178" displayMode="EXPANDED" featureVisibilityWindow="-1" fontSize="10" id="/Users/mvandenb/src/galaxy/database/jobs_directory/000/350/working/0.rover_corrected.bam.bam" name="rover_corrected.bam" sortable="true" visible="true">
+                <RenderOptions colorByTag="CD" colorOption="TAG" flagUnmappedPairs="false" groupByOption="NONE" groupByTag="BR" linkByTag="READNAME" linkedReads="false" maxInsertSize="1000" minInsertSize="50" quickConsensusMode="false" shadeBasesOption="QUALITY" shadeCenters="true" showAllBases="false" sortByTag="" viewPairs="false"/>
+            </Track>
+            </Panel>
+    <Panel height="186" name="FeaturePanel" width="1920">
+        <Track altColor="0,0,178" autoScale="false" color="0,0,178" displayMode="COLLAPSED" featureVisibilityWindow="-1" fontSize="10" id="Reference sequence" name="Reference sequence" sortable="false" visible="true"/>
+    </Panel>
+    <PanelLayout dividerFractions="0.004995836802664446,0.12905911740216486,0.2681099084096586,0.5512073272273106,0.8409658617818485"/>
+</Session>
+        
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