Mercurial > repos > mvdbeek > docker_scriptrunner

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planemo upload for repository https://github.com/mvdbeek/docker_scriptrunner/ commit ae672027942a606c1a5e302348279a5493151c11-dirty
author mvdbeek
date Fri, 08 Jul 2016 15:09:10 -0400
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1 # Script runner base image
2 #
3 # VERSION 0.3
4 # This Dockerfile is the base system for executing scripts with the docker scriptrunner.
5
6 FROM mvdbeek/scriptrunner
7
8 MAINTAINER Marius van den Beek, m.vandenbeek@gmail.com
9
10 RUN bash -c ". activate default && \
11 conda install -y ncurses biopython perl-bioperl bedtools bioconductor-deseq2 bioconductor-edger numpy scipy"
12 CMD /bin/bash -c ". activate default && exec /bin/bash"