Mercurial > repos > matthias > data_manager_dada2

comparison data_manager_conf.xml @ 8:da93e6a3fe23 draft

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planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/data_managers/data_manager_dada2 commit 5d8314337211e041568578b0e85001af05b73c2a
author matthias
date Wed, 19 Jun 2019 08:15:26 -0400
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7:42bbbc4b4739 8:da93e6a3fe23
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/dada2_fetcher.xml" id="dada2_fetcher">
4 <data_table name="dada2_taxonomy">
5 <output>
6 <column name="value" />
7 <column name="name" />
8 <column name="path" output_ref="out_file">
9 <move type="file" relativize_symlinks="True">
10 <source>${path}</source>
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">dada2/${path}</target>
12 </move>
13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/dada2/${path}</value_translation>
14 <value_translation type="function">abspath</value_translation>
15 </column>
16 <column name="taxlevels" />
17 </output>
18 </data_table>
19 <data_table name="dada2_species">
20 <output>
21 <column name="value" />
22 <column name="name" />
23 <column name="path" output_ref="out_file">
24 <move type="file" relativize_symlinks="True">
25 <source>${path}</source>
26 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">dada2/${path}</target>
27 </move>
28 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/dada2/${path}</value_translation>
29 <value_translation type="function">abspath</value_translation>
30 </column>
31 </output>
32 </data_table>
33 </data_manager>
34 </data_managers>