Mercurial > repos > matthias > dada2_plotqualityprofile
diff dada2_plotQualityProfile.xml @ 11:36224cf72a7b draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit b59ed2476188176bb5b2973f59899b7d733e7641-dirty
author | matthias |
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date | Thu, 29 Aug 2019 09:02:34 -0400 |
parents | d908015e5889 |
children |
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--- a/dada2_plotQualityProfile.xml Tue May 28 12:47:08 2019 -0400 +++ b/dada2_plotQualityProfile.xml Thu Aug 29 09:02:34 2019 -0400 @@ -1,9 +1,10 @@ -<tool id="dada2_plotQualityProfile" name="dada2: plotQualityProfile" version="@DADA2_VERSION@+galaxy@WRAPPER_VERSION@"> +<tool id="dada2_plotQualityProfile" name="dada2: plotQualityProfile" version="@DADA2_VERSION@+galaxy@WRAPPER_VERSION@" profile="19.09"> <description>plot a visual summary of the quality scores</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> + <expand macro="stdio"/> <expand macro="version_command"/> <command detect_errors="exit_code"><![CDATA[ ##name files by linking @@ -175,6 +176,8 @@ The distribution of quality scores at each position is shown as a grey-scale heat map, with dark colors corresponding to higher frequency. The plotted lines show positional summary statistics: green is the mean, orange is the median, and the dashed orange lines are the 25th and 75th quantiles. If the sequences vary in length, a red line will be plotted showing the percentage of reads that extend to at least that position. + +@HELP_OVERVIEW@ ]]></help> <expand macro="citations"/> </tool>