diff dada2_plotQualityProfile.xml @ 11:36224cf72a7b draft

planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit b59ed2476188176bb5b2973f59899b7d733e7641-dirty
author matthias
date Thu, 29 Aug 2019 09:02:34 -0400
parents d908015e5889
children
line wrap: on
line diff
--- a/dada2_plotQualityProfile.xml	Tue May 28 12:47:08 2019 -0400
+++ b/dada2_plotQualityProfile.xml	Thu Aug 29 09:02:34 2019 -0400
@@ -1,9 +1,10 @@
-<tool id="dada2_plotQualityProfile" name="dada2: plotQualityProfile" version="@DADA2_VERSION@+galaxy@WRAPPER_VERSION@">
+<tool id="dada2_plotQualityProfile" name="dada2: plotQualityProfile" version="@DADA2_VERSION@+galaxy@WRAPPER_VERSION@" profile="19.09">
     <description>plot a visual summary of the quality scores</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements"/>
+    <expand macro="stdio"/>
     <expand macro="version_command"/>
     <command detect_errors="exit_code"><![CDATA[
 ##name files by linking
@@ -175,6 +176,8 @@
 
 The distribution of quality scores at each position is shown as a grey-scale heat map, with dark colors corresponding to higher frequency. The plotted lines show positional summary statistics: green is the mean, orange is the median, and the dashed orange lines are the 25th and 75th quantiles. If the sequences vary in length, a red line will be plotted showing the percentage of reads that extend
 to at least that position.
+
+@HELP_OVERVIEW@
     ]]></help>
     <expand macro="citations"/>
 </tool>