Mercurial > repos > kls286 > chap_test_20230328

changeset 3:1cf636a22185 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline/tree/galaxy commit 1401a7e1ae007a6bda260d147f9b879e789b73e0-dirty
author kls286
date Tue, 28 Mar 2023 15:33:06 +0000
parents 0724b6692868
children 649eb2ea2f49
files chap.xml run_CHAP
diffstat 2 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/chap.xml	Tue Mar 28 15:28:45 2023 +0000
+++ b/chap.xml	Tue Mar 28 15:33:06 2023 +0000
@@ -3,7 +3,7 @@
       <requirement type="package" version="0.0.1">ChessAnalysisPipeline</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        cp '$input' data.csv && CHAP --config '$config'
+        cp '$input' data.csv && run_CHAP --config '$config'
     ]]></command>
     <inputs>
         <param type="data" name="config" format="yaml" />
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/run_CHAP	Tue Mar 28 15:33:06 2023 +0000
@@ -0,0 +1,3 @@
+#!/bin/bash
+
+python -m CHAP "$@"