Mercurial > repos > kls286 > chap_test_20230328

comparison chap.xml @ 14:bca70009506d draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline/tree/galaxy commit 2d65c72740d0439b8385378a890b3763d717f152-dirty
author kls286
date Wed, 29 Mar 2023 18:26:46 +0000
parents 455e0b0bf8d4
children
comparison
equal deleted inserted replaced
13:455e0b0bf8d4 14:bca70009506d
1 <tool id="chap" name="CHESS Analysis Pipeline" version="0.1.0+galaxy0" python_template_version="3.5" profile="21.05"> 1 <tool id="chap" name="CHESS Analysis Pipeline" version="0.1.0+galaxy0" python_template_version="3.5" profile="21.05">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="0.0.2">chessanalysispipeline</requirement> 3 <requirement type="package" version="0.0.2">chessanalysispipeline</requirement>
4 </requirements> 4 </requirements>
5 <command detect_errors="exit_code"><![CDATA[ 5 <command detect_errors="exit_code"><![CDATA[
6 cp '$input' data.csv && CHAP --config '$config' 6 cp '$input' data.csv &&
7 CHAP --config '$config'
7 ]]></command> 8 ]]></command>
8 <inputs> 9 <inputs>
9 <param type="data" name="config" format="yaml" /> 10 <param type="data" name="config" format="yaml" />
10 <param type="data" name="input" format="csv" /> 11 <param type="data" name="input" format="csv" />
11 </inputs> 12 </inputs>
12 <outputs> 13 <outputs>
13 <data name="output" format="csv" from_work_dir="data.out" /> 14 <data name="output" format="csv" from_work_dir="data.out"/>
14 </outputs> 15 </outputs>
15 <tests> 16 <tests>
16 <test> 17 <test>
17 <param name="config" value="config.yaml"/> 18 <param name="config" value="config.yaml"/>
18 <param name="input" value="data.csv"/> 19 <param name="input" value="data.csv"/>