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annotate tool_data_table_conf.xml.sample @ 20:7a46f9a72d3c

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Fix version on SNPEFF_DATABASE_URL in snpEff_macros.xml
author Jim Johnson <jj@umn.edu>
date Tue, 13 Jan 2015 16:01:31 -0600
parents 36f3c82323e6
children bb0797deab78
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1 <tables>
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36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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2 <table name="snpeffv_databases" comment_char="#">
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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3 <columns>key, version, value, name</columns>
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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4 <file path="tool-data/snpeffv_databases.loc" />
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5 </table>
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6 <table name="snpeffv_genomedb" comment_char="#">
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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7 <columns>key, version, value, name, path</columns>
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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8 <file path="tool-data/snpeffv_genomedb.loc" />
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9 </table>
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10 <table name="snpeffv_regulationdb" comment_char="#">
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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11 <columns>key, version, genome, value, name</columns>
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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12 <file path="tool-data/snpeffv_regulationdb.loc" />
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13 </table>
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14 <table name="snpeffv_annotations" comment_char="#">
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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15 <columns>key, version, genome, value, name</columns>
36f3c82323e6 Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
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16 <file path="tool-data/snpeffv_annotations.loc" />
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8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
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17 </table>
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18 </tables>
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