Mercurial > repos > jjohnson > package_gmap_2013_05_09

comparison tool_dependencies.xml @ 0:03bb09b717ae

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author jjohnson
date Wed, 05 Jun 2013 16:26:25 -0400
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children 8bacc25e2023
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1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="gmap" version="2013-05-09">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url" target_filename="gmap-2013-05-09.tar.gz">http://research-pub.gene.com/gmap/src/gmap-gsnap-2013-05-09.tar.gz</action>
7 <action type="shell_command"> ./configure --prefix=`pwd` --with-gmapdb=$INSTALL_DIR/gmapdb</action>
8 <action type="shell_command">make</action>
9 <action type="shell_command">make install</action>
10 <action type="move_directory_files">
11 <source_directory>bin</source_directory>
12 <destination_directory>$INSTALL_DIR/bin</destination_directory>
13 </action>
14 <action type="set_environment">
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
16 </action>
17 </actions>
18 </install>
19 <readme>
20 </readme>
21 </package>
22 </tool_dependency>