changeset 0:8ba71aead5bc draft

planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/gffutils commit 186424e18ed21f2aea293fa7c4b654a9a4fb5d8c-dirty
author jjohnson
date Sun, 08 Apr 2018 13:26:47 -0400
parents
children 8880c2e4b2ee
files create_gffdb.py create_gffdb.xml test-data/GRCm38.gff3 test-data/GRCm38.gff3.sqlite test-data/GRCm38.gtf test-data/GRCm38.sqlite
diffstat 6 files changed, 313 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/create_gffdb.py	Sun Apr 08 13:26:47 2018 -0400
@@ -0,0 +1,35 @@
+#!/usr/bin/env python
+
+from __future__ import print_function
+
+import argparse
+import json
+import sys
+
+import gffutils
+
+
+def __main__():
+    parser = argparse.ArgumentParser(
+        description='Convert mga output to bed and tsv')
+    parser.add_argument(
+        'input_gff',
+        help="gff3 or gtf file to load")
+    parser.add_argument(
+        'gff_sqlite',
+        help="sqlite file")
+    args = parser.parse_args()
+
+    db = gffutils.create_db(args.input_gff, args.gff_sqlite)
+    version = db.execute('SELECT version FROM meta').fetchone()[0]
+    print('version:%s' % version,file=sys.stdout)
+    dialect = db.execute('SELECT dialect FROM meta').fetchone()[0]
+    info = json.loads(dialect)
+    if 'fmt' in info:
+        print('format:%s' % info['fmt'],file=sys.stdout)
+    seqids = [r[0] for r in db.execute('SELECT distinct seqid  FROM features').fetchall()]
+    print('seqids:%s' % ','.join(seqids),file=sys.stdout)
+
+
+if __name__ == "__main__":
+    __main__()
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/create_gffdb.xml	Sun Apr 08 13:26:47 2018 -0400
@@ -0,0 +1,27 @@
+<tool id="create_gffdb" name="Create GFF DB for GTF or GFF3" version="0.1.0">
+    <description>gffutils sqlite db</description>
+    <requirements>
+        <requirement type="package">gffutils</requirement>
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+        python '$__tool_directory__/create_gffdb.py' '$input' '$output'
+    ]]></command>
+    <inputs>
+        <param name="input" type="data" format="gtf,gff3" label="GTF or GFF3 Annotation"/>
+    </inputs>
+    <outputs>
+        <data name="output" format="sqlite" label="${tool.name} ${input.name}.sqlite" />
+    </outputs>
+    <tests>
+        <test>
+            <param name="input" ftype="gtf" value="GRCm38.gtf"/>
+            <output name="output" file="GRCm38.gtf.sqlite" ftype="sqlite" compare="sim_size" delta="5000" />
+        </test>
+        <test>
+            <param name="input" ftype="gff3" value="GRCm38.gff3"/>
+            <output name="output" file="GRCm38.gff3.sqlite" ftype="sqlite" compare="sim_size" delta="5000" />
+        </test>
+    </tests>
+    <help><![CDATA[
+    ]]></help>
+</tool>
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/GRCm38.gff3	Sun Apr 08 13:26:47 2018 -0400
@@ -0,0 +1,25 @@
+##gff-version   3
+##sequence-region   1 1 195471971
+##sequence-region   10 1 130694993
+##sequence-region   11 1 122082543
+##sequence-region   12 1 120129022
+##sequence-region   13 1 120421639
+##sequence-region   14 1 124902244
+##sequence-region   15 1 104043685
+##sequence-region   16 1 98207768
+##sequence-region   17 1 94987271
+1	ensembl_havana	gene	3999557	4409241	.	-	.	ID=gene:ENSMUSG00000025900;Name=Rp1;biotype=protein_coding;description=retinitis pigmentosa 1 (human) [Source:MGI Symbol%3BAcc:MGI:1341105];gene_id=ENSMUSG00000025900;havana_gene=OTTMUSG00000049985;havana_version=3;logic_name=ensembl_havana_gene;version=11
+1	ensembl_havana	mRNA	3999557	4409241	.	-	.	ID=transcript:ENSMUST00000208660;Parent=gene:ENSMUSG00000025900;Name=Rp1-003;biotype=protein_coding;havana_transcript=OTTMUST00000145515;havana_version=1;tag=basic;transcript_id=ENSMUST00000208660;version=1
+1	ensembl_havana	aberrant_processed_transcript	4290846	4409241	.	-	.	ID=transcript:ENSMUST00000208793;Parent=gene:ENSMUSG00000025900;Name=Rp1-002;biotype=retained_intron;havana_transcript=OTTMUST00000127194;havana_version=2;transcript_id=ENSMUST00000208793;version=1
+1	ensembl_havana	mRNA	4344146	4360314	.	-	.	ID=transcript:ENSMUST00000027032;Parent=gene:ENSMUSG00000025900;Name=Rp1-001;biotype=protein_coding;ccdsid=CCDS14804.1;havana_transcript=OTTMUST00000127195;havana_version=2;tag=basic;transcript_id=ENSMUST00000027032;transcript_support_level=1;version=5
+2	ensembl_havana	gene	180024987	180035465	.	+	.	ID=gene:ENSMUSG00000039108;Name=Lsm14b;biotype=protein_coding;description=LSM family member 14B [Source:MGI Symbol%3BAcc:MGI:3040677];gene_id=ENSMUSG00000039108;havana_gene=OTTMUSG00000016234;havana_version=3;logic_name=ensembl_havana_gene;version=14
+2	ensembl_havana	mRNA	180024987	180035461	.	+	.	ID=transcript:ENSMUST00000055485;Parent=gene:ENSMUSG00000039108;Name=Lsm14b-001;biotype=protein_coding;ccdsid=CCDS17165.2;havana_transcript=OTTMUST00000038901;havana_version=2;tag=basic;transcript_id=ENSMUST00000055485;transcript_support_level=1;version=11
+2	ensembl_havana	mRNA	180026398	180035465	.	+	.	ID=transcript:ENSMUST00000058764;Parent=gene:ENSMUSG00000039108;Name=Lsm14b-002;biotype=protein_coding;havana_transcript=OTTMUST00000038902;havana_version=2;tag=basic;transcript_id=ENSMUST00000058764;transcript_support_level=1;version=5
+2	ensembl_havana	processed_transcript	180027909	180033810	.	+	.	ID=transcript:ENSMUST00000140257;Parent=gene:ENSMUSG00000039108;Name=Lsm14b-003;biotype=processed_transcript;havana_transcript=OTTMUST00000038903;havana_version=1;transcript_id=ENSMUST00000140257;transcript_support_level=5;version=1
+11	ensembl_havana	gene	4873951	4894200	.	+	.	ID=gene:ENSMUSG00000034285;Name=Nipsnap1;biotype=protein_coding;description=nipsnap homolog 1 (C. elegans) [Source:MGI Symbol%3BAcc:MGI:1278344];gene_id=ENSMUSG00000034285;havana_gene=OTTMUSG00000005074;havana_version=3;logic_name=ensembl_havana_gene;version=15
+11	ensembl_havana	mRNA	4873951	4894200	.	+	.	ID=transcript:ENSMUST00000038570;Parent=gene:ENSMUSG00000034285;Name=Nipsnap1-001;biotype=protein_coding;ccdsid=CCDS24392.1;havana_transcript=OTTMUST00000011320;havana_version=1;tag=basic;transcript_id=ENSMUST00000038570;transcript_support_level=1;version=8
+11	ensembl_havana	NMD_transcript_variant	4873999	4893617	.	+	.	ID=transcript:ENSMUST00000136552;Parent=gene:ENSMUSG00000034285;Name=Nipsnap1-002;biotype=nonsense_mediated_decay;havana_transcript=OTTMUST00000011321;havana_version=2;transcript_id=ENSMUST00000136552;transcript_support_level=1;version=7
+11	ensembl_havana	processed_transcript	4874005	4884404	.	+	.	ID=transcript:ENSMUST00000135405;Parent=gene:ENSMUSG00000034285;Name=Nipsnap1-006;biotype=processed_transcript;havana_transcript=OTTMUST00000061468;havana_version=1;transcript_id=ENSMUST00000135405;transcript_support_level=2;version=7
+11	ensembl_havana	mRNA	4883194	4889131	.	+	.	ID=transcript:ENSMUST00000139737;Parent=gene:ENSMUSG00000034285;Name=Nipsnap1-003;biotype=protein_coding;havana_transcript=OTTMUST00000011322;havana_version=2;transcript_id=ENSMUST00000139737;transcript_support_level=5;version=1
+11	ensembl_havana	processed_transcript	4883206	4889973	.	+	.	ID=transcript:ENSMUST00000149603;Parent=gene:ENSMUSG00000034285;Name=Nipsnap1-004;biotype=processed_transcript;havana_transcript=OTTMUST00000011323;havana_version=1;transcript_id=ENSMUST00000149603;transcript_support_level=3;version=7
+11	ensembl_havana	processed_transcript	4883264	4884116	.	+	.	ID=transcript:ENSMUST00000141269;Parent=gene:ENSMUSG00000034285;Name=Nipsnap1-005;biotype=processed_transcript;havana_transcript=OTTMUST00000011324;havana_version=1;transcript_id=ENSMUST00000141269;transcript_support_level=3;version=1
Binary file test-data/GRCm38.gff3.sqlite has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/GRCm38.gtf	Sun Apr 08 13:26:47 2018 -0400
@@ -0,0 +1,226 @@
+#!genome-build GRCm38.p4
+#!genome-version GRCm38
+#!genome-date 2012-01
+#!genome-build-accession NCBI:GCA_000001635.6
+#!genebuild-last-updated 2016-07
+1	ensembl_havana	gene	3999557	4409241	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3";
+1	havana	transcript	3999557	4409241	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; tag "basic";
+1	havana	exon	4409170	4409241	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378580"; exon_version "1"; tag "basic";
+1	havana	CDS	4409170	4409187	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	start_codon	4409185	4409187	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; tag "basic";
+1	havana	exon	4352202	4352837	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "2"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001381766"; exon_version "1"; tag "basic";
+1	havana	CDS	4352202	4352837	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "2"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4351910	4352081	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "3"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379531"; exon_version "1"; tag "basic";
+1	havana	CDS	4351910	4352081	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "3"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4311270	4311433	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "4"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001380053"; exon_version "1"; tag "basic";
+1	havana	CDS	4311270	4311433	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "4"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4292926	4293012	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "5"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001377871"; exon_version "1"; tag "basic";
+1	havana	CDS	4292926	4293012	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "5"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4284766	4284898	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "6"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379434"; exon_version "1"; tag "basic";
+1	havana	CDS	4284766	4284898	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "6"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4267469	4267620	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "7"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379919"; exon_version "1"; tag "basic";
+1	havana	CDS	4267469	4267620	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "7"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4261527	4261605	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "8"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001380048"; exon_version "1"; tag "basic";
+1	havana	CDS	4261527	4261605	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "8"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4245031	4245106	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "9"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001382043"; exon_version "1"; tag "basic";
+1	havana	CDS	4245031	4245106	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "9"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4243543	4243619	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "10"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379965"; exon_version "1"; tag "basic";
+1	havana	CDS	4243543	4243619	.	-	1	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "10"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4243417	4243448	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "11"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379150"; exon_version "1"; tag "basic";
+1	havana	CDS	4243417	4243448	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "11"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4243133	4243262	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "12"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378202"; exon_version "1"; tag "basic";
+1	havana	CDS	4243133	4243262	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "12"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4231053	4231144	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "13"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001381486"; exon_version "1"; tag "basic";
+1	havana	CDS	4231053	4231144	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "13"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4228443	4228619	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "14"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001382087"; exon_version "1"; tag "basic";
+1	havana	CDS	4228443	4228619	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "14"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4226611	4226823	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "15"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001377002"; exon_version "1"; tag "basic";
+1	havana	CDS	4226611	4226823	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "15"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4206660	4206837	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "16"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378749"; exon_version "1"; tag "basic";
+1	havana	CDS	4206660	4206837	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "16"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4197534	4197641	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "17"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379718"; exon_version "1"; tag "basic";
+1	havana	CDS	4197534	4197641	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "17"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4170205	4170404	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "18"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001381401"; exon_version "1"; tag "basic";
+1	havana	CDS	4170205	4170404	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "18"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4163855	4163941	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "19"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001381514"; exon_version "1"; tag "basic";
+1	havana	CDS	4163855	4163941	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "19"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4148612	4148744	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "20"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001376619"; exon_version "1"; tag "basic";
+1	havana	CDS	4148612	4148744	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "20"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4147812	4147963	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "21"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378642"; exon_version "1"; tag "basic";
+1	havana	CDS	4147812	4147963	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "21"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4142612	4142766	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "22"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001379236"; exon_version "1"; tag "basic";
+1	havana	CDS	4142612	4142766	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "22"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4120015	4120073	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "23"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001377224"; exon_version "1"; tag "basic";
+1	havana	CDS	4120015	4120073	.	-	1	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "23"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4119668	4119712	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "24"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001381635"; exon_version "1"; tag "basic";
+1	havana	CDS	4119668	4119712	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "24"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4092617	4092780	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "25"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378903"; exon_version "1"; tag "basic";
+1	havana	CDS	4092617	4092780	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "25"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4041888	4042107	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "26"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001380904"; exon_version "1"; tag "basic";
+1	havana	CDS	4041888	4042107	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "26"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4024736	4024890	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "27"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001380986"; exon_version "1"; tag "basic";
+1	havana	CDS	4024736	4024890	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "27"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4019070	4019148	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "28"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378728"; exon_version "1"; tag "basic";
+1	havana	CDS	4019070	4019148	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "28"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	4007656	4007737	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "29"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001381361"; exon_version "1"; tag "basic";
+1	havana	CDS	4007656	4007737	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "29"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	exon	3999557	3999617	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "30"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; exon_id "ENSMUSE00001378424"; exon_version "1"; tag "basic";
+1	havana	CDS	3999560	3999617	.	-	1	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "30"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; protein_id "ENSMUSP00000146439"; protein_version "1"; tag "basic";
+1	havana	stop_codon	3999557	3999559	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; exon_number "30"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; tag "basic";
+1	havana	five_prime_utr	4409188	4409241	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208660"; transcript_version "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000145515"; havana_transcript_version "1"; tag "basic";
+1	havana	transcript	4290846	4409241	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208793"; transcript_version "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-002"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTMUST00000127194"; havana_transcript_version "2";
+1	havana	exon	4409170	4409241	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208793"; transcript_version "1"; exon_number "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-002"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTMUST00000127194"; havana_transcript_version "2"; exon_id "ENSMUSE00001379779"; exon_version "1";
+1	havana	exon	4352202	4352837	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208793"; transcript_version "1"; exon_number "2"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-002"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTMUST00000127194"; havana_transcript_version "2"; exon_id "ENSMUSE00001377400"; exon_version "1";
+1	havana	exon	4351910	4352081	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208793"; transcript_version "1"; exon_number "3"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-002"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTMUST00000127194"; havana_transcript_version "2"; exon_id "ENSMUSE00001380148"; exon_version "1";
+1	havana	exon	4290846	4293012	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000208793"; transcript_version "1"; exon_number "4"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-002"; transcript_source "havana"; transcript_biotype "retained_intron"; havana_transcript "OTTMUST00000127194"; havana_transcript_version "2"; exon_id "ENSMUSE00001345123"; exon_version "1";
+1	ensembl_havana	transcript	4344146	4360314	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	exon	4360200	4360314	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "1"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; exon_id "ENSMUSE00000390984"; exon_version "5"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	exon	4352202	4352837	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "2"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; exon_id "ENSMUSE00000232073"; exon_version "3"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	CDS	4352202	4352825	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "2"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; protein_id "ENSMUSP00000027032"; protein_version "4"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	start_codon	4352823	4352825	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "2"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	exon	4351910	4352081	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "3"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; exon_id "ENSMUSE00001379531"; exon_version "1"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	CDS	4351910	4352081	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "3"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; protein_id "ENSMUSP00000027032"; protein_version "4"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	exon	4344146	4350091	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "4"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; exon_id "ENSMUSE00000232057"; exon_version "6"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	CDS	4344603	4350091	.	-	2	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "4"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; protein_id "ENSMUSP00000027032"; protein_version "4"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	stop_codon	4344600	4344602	.	-	0	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; exon_number "4"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	five_prime_utr	4360200	4360314	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	five_prime_utr	4352826	4352837	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+1	ensembl_havana	three_prime_utr	4344146	4344599	.	-	.	gene_id "ENSMUSG00000025900"; gene_version "11"; transcript_id "ENSMUST00000027032"; transcript_version "5"; gene_name "Rp1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000049985"; havana_gene_version "3"; transcript_name "Rp1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS14804"; havana_transcript "OTTMUST00000127195"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	gene	180024987	180035465	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3";
+2	ensembl_havana	transcript	180024987	180035461	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180024987	180025312	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "1"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00001083143"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180025186	180025312	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "1"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	start_codon	180025186	180025188	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "1"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180026635	180026798	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "2"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00001071834"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180026635	180026798	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "2"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180027900	180028035	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "3"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00001260227"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180027900	180028035	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "3"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180031361	180031528	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "4"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00001220044"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180031361	180031528	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "4"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180031794	180031871	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00000227860"; exon_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180031794	180031871	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180032061	180032222	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "6"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00001213901"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180032061	180032222	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "6"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180032501	180032651	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "7"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00001207773"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180032501	180032651	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "7"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180033686	180033870	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "8"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00000371542"; exon_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	CDS	180033686	180033854	.	+	1	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "8"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; protein_id "ENSMUSP00000055036"; protein_version "5"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	stop_codon	180033855	180033857	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "8"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	exon	180034298	180035461	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; exon_number "9"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; exon_id "ENSMUSE00000833597"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	five_prime_utr	180024987	180025185	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	three_prime_utr	180033858	180033870	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	ensembl_havana	three_prime_utr	180034298	180035461	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000055485"; transcript_version "11"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS17165"; havana_transcript "OTTMUST00000038901"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	transcript	180026398	180035465	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180026398	180026798	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "1"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00000591628"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180027900	180028035	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "2"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00001301698"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180027966	180028035	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "2"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	start_codon	180027966	180027968	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "2"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180028958	180029074	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "3"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00000356208"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180028958	180029074	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "3"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180031361	180031528	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "4"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00001220044"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180031361	180031528	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "4"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180031794	180031871	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00000227860"; exon_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180031794	180031871	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180032061	180032222	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "6"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00001213901"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180032061	180032222	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "6"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180032501	180032651	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "7"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00001207773"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180032501	180032651	.	+	2	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "7"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180033686	180033870	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "8"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00000371542"; exon_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	CDS	180033686	180033854	.	+	1	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "8"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; protein_id "ENSMUSP00000062519"; protein_version "4"; tag "basic"; transcript_support_level "1";
+2	havana	stop_codon	180033855	180033857	.	+	0	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "8"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	exon	180034298	180035465	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; exon_number "9"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; exon_id "ENSMUSE00000791446"; exon_version "1"; tag "basic"; transcript_support_level "1";
+2	havana	five_prime_utr	180026398	180026798	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	five_prime_utr	180027900	180027965	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	three_prime_utr	180033858	180033870	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	three_prime_utr	180034298	180035465	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000058764"; transcript_version "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-002"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000038902"; havana_transcript_version "2"; tag "basic"; transcript_support_level "1";
+2	havana	transcript	180027909	180033810	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000140257"; transcript_version "1"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-003"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000038903"; havana_transcript_version "1"; transcript_support_level "5";
+2	havana	exon	180027909	180028035	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000140257"; transcript_version "1"; exon_number "1"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-003"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000038903"; havana_transcript_version "1"; exon_id "ENSMUSE00000757545"; exon_version "1"; transcript_support_level "5";
+2	havana	exon	180031361	180031528	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000140257"; transcript_version "1"; exon_number "2"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-003"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000038903"; havana_transcript_version "1"; exon_id "ENSMUSE00001287056"; exon_version "1"; transcript_support_level "5";
+2	havana	exon	180032061	180032222	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000140257"; transcript_version "1"; exon_number "3"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-003"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000038903"; havana_transcript_version "1"; exon_id "ENSMUSE00001265842"; exon_version "1"; transcript_support_level "5";
+2	havana	exon	180032501	180032651	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000140257"; transcript_version "1"; exon_number "4"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-003"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000038903"; havana_transcript_version "1"; exon_id "ENSMUSE00001214894"; exon_version "1"; transcript_support_level "5";
+2	havana	exon	180033686	180033810	.	+	.	gene_id "ENSMUSG00000039108"; gene_version "14"; transcript_id "ENSMUST00000140257"; transcript_version "1"; exon_number "5"; gene_name "Lsm14b"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000016234"; havana_gene_version "3"; transcript_name "Lsm14b-003"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000038903"; havana_transcript_version "1"; exon_id "ENSMUSE00000781779"; exon_version "1"; transcript_support_level "5";
+11	ensembl_havana	gene	4873951	4894200	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3";
+11	ensembl_havana	transcript	4873951	4894200	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4873951	4874103	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00000802397"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4874006	4874103	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	start_codon	4874006	4874008	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4883368	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001303033"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4883368	4883495	.	+	1	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001260957"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4883726	4883771	.	+	2	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4884022	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001230977"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4884022	4884116	.	+	1	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4888880	4888950	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "5"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001207460"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4888880	4888950	.	+	2	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "5"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4889097	4889237	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "6"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001235423"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4889097	4889237	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "6"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4889533	4889564	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001306295"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4889533	4889564	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4889892	4889986	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "8"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001215642"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4889892	4889986	.	+	1	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "8"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4891403	4891486	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "9"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00001285170"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4891403	4891486	.	+	2	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "9"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	exon	4893120	4894200	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "10"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; exon_id "ENSMUSE00000307866"; exon_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	CDS	4893120	4893181	.	+	2	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "10"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; protein_id "ENSMUSP00000049338"; protein_version "2"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	stop_codon	4893182	4893184	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; exon_number "10"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	five_prime_utr	4873951	4874005	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; tag "basic"; transcript_support_level "1";
+11	ensembl_havana	three_prime_utr	4893185	4894200	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000038570"; transcript_version "8"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-001"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS24392"; havana_transcript "OTTMUST00000011320"; havana_transcript_version "1"; tag "basic"; transcript_support_level "1";
+11	havana	transcript	4873999	4893617	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4873999	4874103	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001078255"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	CDS	4874006	4874103	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; protein_id "ENSMUSP00000117760"; protein_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	start_codon	4874006	4874008	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4882901	4883171	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001067865"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	CDS	4882901	4882985	.	+	1	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; protein_id "ENSMUSP00000117760"; protein_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	stop_codon	4882986	4882988	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4883368	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001244170"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001283021"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4884022	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "5"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001310154"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4888880	4888950	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "6"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001274768"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4889097	4889237	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001231554"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4889533	4889564	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "8"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001240834"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4889892	4889986	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "9"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001277403"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4891403	4891486	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "10"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001261240"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	exon	4893120	4893617	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; exon_number "11"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; exon_id "ENSMUSE00001022756"; exon_version "1"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	five_prime_utr	4873999	4874005	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4882989	4883171	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4883368	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4884022	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4888880	4888950	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4889097	4889237	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4889533	4889564	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4889892	4889986	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4891403	4891486	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	three_prime_utr	4893120	4893617	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000136552"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-002"; transcript_source "havana"; transcript_biotype "nonsense_mediated_decay"; havana_transcript "OTTMUST00000011321"; havana_transcript_version "2"; tag "mRNA_end_NF"; transcript_support_level "1";
+11	havana	transcript	4874005	4884404	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000135405"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-006"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000061468"; havana_transcript_version "1"; transcript_support_level "2";
+11	havana	exon	4874005	4874103	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000135405"; transcript_version "7"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-006"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000061468"; havana_transcript_version "1"; exon_id "ENSMUSE00000758406"; exon_version "1"; transcript_support_level "2";
+11	havana	exon	4883368	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000135405"; transcript_version "7"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-006"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000061468"; havana_transcript_version "1"; exon_id "ENSMUSE00001244170"; exon_version "1"; transcript_support_level "2";
+11	havana	exon	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000135405"; transcript_version "7"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-006"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000061468"; havana_transcript_version "1"; exon_id "ENSMUSE00001283021"; exon_version "1"; transcript_support_level "2";
+11	havana	exon	4884022	4884404	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000135405"; transcript_version "7"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-006"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000061468"; havana_transcript_version "1"; exon_id "ENSMUSE00000774709"; exon_version "1"; transcript_support_level "2";
+11	havana	transcript	4883194	4889131	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	exon	4883194	4883253	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; exon_id "ENSMUSE00000732339"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	CDS	4883219	4883253	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; protein_id "ENSMUSP00000122885"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	start_codon	4883219	4883221	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	exon	4883368	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; exon_id "ENSMUSE00001303033"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	CDS	4883368	4883495	.	+	1	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; protein_id "ENSMUSP00000122885"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	exon	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; exon_id "ENSMUSE00001260957"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	CDS	4883726	4883771	.	+	2	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; protein_id "ENSMUSP00000122885"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	exon	4884022	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; exon_id "ENSMUSE00001230977"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	CDS	4884022	4884116	.	+	1	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; protein_id "ENSMUSP00000122885"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	exon	4888880	4888950	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "5"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; exon_id "ENSMUSE00001207460"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	CDS	4888880	4888950	.	+	2	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "5"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; protein_id "ENSMUSP00000122885"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	exon	4889097	4889131	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "6"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; exon_id "ENSMUSE00000789146"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	CDS	4889097	4889131	.	+	0	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; exon_number "6"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; protein_id "ENSMUSP00000122885"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	five_prime_utr	4883194	4883218	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000139737"; transcript_version "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-003"; transcript_source "havana"; transcript_biotype "protein_coding"; havana_transcript "OTTMUST00000011322"; havana_transcript_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+11	havana	transcript	4883206	4889973	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; transcript_support_level "3";
+11	havana	exon	4883206	4883253	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00000799326"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4883368	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00001244170"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00001283021"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4884022	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "4"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00001310154"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4889097	4889237	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "5"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00001231554"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4889533	4889564	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "6"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00001240834"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4889892	4889973	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000149603"; transcript_version "7"; exon_number "7"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-004"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011323"; havana_transcript_version "1"; exon_id "ENSMUSE00000769299"; exon_version "1"; transcript_support_level "3";
+11	havana	transcript	4883264	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000141269"; transcript_version "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-005"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011324"; havana_transcript_version "1"; transcript_support_level "3";
+11	havana	exon	4883264	4883495	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000141269"; transcript_version "1"; exon_number "1"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-005"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011324"; havana_transcript_version "1"; exon_id "ENSMUSE00000736166"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4883726	4883771	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000141269"; transcript_version "1"; exon_number "2"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-005"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011324"; havana_transcript_version "1"; exon_id "ENSMUSE00001283021"; exon_version "1"; transcript_support_level "3";
+11	havana	exon	4884022	4884116	.	+	.	gene_id "ENSMUSG00000034285"; gene_version "15"; transcript_id "ENSMUST00000141269"; transcript_version "1"; exon_number "3"; gene_name "Nipsnap1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; havana_gene "OTTMUSG00000005074"; havana_gene_version "3"; transcript_name "Nipsnap1-005"; transcript_source "havana"; transcript_biotype "processed_transcript"; havana_transcript "OTTMUST00000011324"; havana_transcript_version "1"; exon_id "ENSMUSE00001310154"; exon_version "1"; transcript_support_level "3";
Binary file test-data/GRCm38.sqlite has changed