Mercurial > repos > jjohnson > eggnog_mapper

comparison tool-data/eggnog_mapper.loc.sample @ 1:7de7487a7e8d draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper commit 666539d2f4b2c8f8367f1bc3786f14a45dc639f6-dirty
author jjohnson
date Tue, 08 Aug 2017 12:40:56 -0400
parents b3ae16ffb54e
children
comparison
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0:b3ae16ffb54e 1:7de7487a7e8d
1 #This is a sample file distributed with Galaxy that enables tools 1 #This is a sample file distributed with Galaxy that enables tools
2 #to use a directory of eggnog_mapper data files. 2 #to use a directory of eggnog_mapper data files.
3 # 3 #
4 # eggnog-mapper requires the following files to be installed in the data directory:
5 # https://github.com/jhcepas/eggnog-mapper/blob/master/data/og2level.tsv.gz
6 # http://eggnogdb.embl.de/download/eggnog_4.5/eggnog-mapper-data/eggnog.db.gz
7 # http://eggnogdb.embl.de/download/eggnog_4.5/eggnog-mapper-data/OG_fasta.tar.gz
8 # In addition individual HMM DBs can be installed from:
9 # http://eggnogdb.embl.de/download/eggnog_4.5/eggnog-mapper-data/hmmdb_levels/
10 # A complete diamond database is available from:
11 # http://eggnogdb.embl.de/download/eggnog_4.5/eggnog-mapper-data/eggnog_proteins.dmnd.gz
12 #
13 #
4 #name value type data_dir 14 #name value type data_dir
5 #eggnog_4.5 eggnog_4.5 data /depot/data2/galaxy/eggnog/eggnog_4.5/data 15 #eggnog_4.5 eggnog_4.5 data /depot/data2/galaxy/eggnog/eggnog_4.5/data
6 #eggnog_4.5arcNOG arcNOG hmmer /depot/data2/galaxy/eggnog/eggnog_4.5/data 16 #eggnog_4.5arcNOG arcNOG hmmer eggnog_4.5
7 #eggnog_4.5euk euk hmmer /depot/data2/galaxy/eggnog/eggnog_4.5/data 17 #eggnog_4.5euk euk hmmer eggnog_4.5
8 #eggnog_4.5dmnd eggnog_proteins.dmnd diamond /depot/data2/galaxy/eggnog/eggnog_4.5/data 18 #eggnog_4.5dmnd eggnog_proteins.dmnd diamond eggnog_4.5
9 #