Mercurial > repos > jjohnson > data_manager_snpsift_dbnsfp

comparison data_manager_conf.xml @ 0:da5d5dc2e55c draft default tip

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author jjohnson
date Wed, 09 Dec 2015 13:58:01 -0500
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-1:000000000000 0:da5d5dc2e55c
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_snpsift_dbnsfp.xml" id="data_manager_snpsift_dbnsfp" >
4 <data_table name="snpsift_dbnsfps"> <!-- Defines a Data Table to be modified. -->
5 <output> <!-- Handle the output of the Data Manager Tool -->
6 <column name="key" /> <!-- columns that are going to be specified by the Data Manager Tool -->
7 <column name="build" /> <!-- columns that are going to be specified by the Data Manager Tool -->
8 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
9 <column name="value" output_ref="out_file" >
10 <move type="directory" relativize_symlinks="True">
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">snpSift/v4_1/dbnsfp</target>
12 </move>
13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/snpSift/v4_1/dbnsfp/${value}</value_translation>
14 <value_translation type="function">abspath</value_translation>
15 </column>
16 <column name="annnotations" /> <!-- columns that are going to be specified by the Data Manager Tool -->
17 </output>
18 </data_table>
19 </data_manager>
20 </data_managers>
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