annotate data_manager_conf.xml @ 0:da5d5dc2e55c draft default tip

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author jjohnson
date Wed, 09 Dec 2015 13:58:01 -0500
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1 <?xml version="1.0"?>
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2 <data_managers>
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3 <data_manager tool_file="data_manager/data_manager_snpsift_dbnsfp.xml" id="data_manager_snpsift_dbnsfp" >
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4 <data_table name="snpsift_dbnsfps"> <!-- Defines a Data Table to be modified. -->
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5 <output> <!-- Handle the output of the Data Manager Tool -->
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6 <column name="key" /> <!-- columns that are going to be specified by the Data Manager Tool -->
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7 <column name="build" /> <!-- columns that are going to be specified by the Data Manager Tool -->
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8 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
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9 <column name="value" output_ref="out_file" >
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10 <move type="directory" relativize_symlinks="True">
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">snpSift/v4_1/dbnsfp</target>
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12 </move>
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/snpSift/v4_1/dbnsfp/${value}</value_translation>
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14 <value_translation type="function">abspath</value_translation>
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15 </column>
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16 <column name="annnotations" /> <!-- columns that are going to be specified by the Data Manager Tool -->
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17 </output>
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18 </data_table>
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19 </data_manager>
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20 </data_managers>
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