view tool_dependencies.xml @ 0:2602ce9c112c draft default tip

planemo upload commit d09a39cd41aca0dadb42216cd4d5ec280a8ce4c4
author jdv
date Sat, 26 Aug 2017 02:39:33 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="porechop" version="0.2.1">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url" sha256sum="c82331531eb25650d59d606527b7357c45791a3c2fd5b75fc2fe98299bb81b38">https://github.com/jvolkening/galaxy-tools/raw/master/binaries/porechop_0_2_1_Linux_x86_64.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                </actions>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>
<![CDATA[
GOTTCHA is an application of a novel, gene-independent and signature-based
metagenomic taxonomic profiling method with significantly smaller false
discovery rates (FDR) that is laptop deployable. Our algorithm was tested and
validated on twenty synthetic and mock datasets ranging in community
composition and complexity, was applied successfully to data generated from
spiked environmental and clinical samples, and robustly demonstrates superior
performance compared with other available tools.
]]> </readme>
    </package>
</tool_dependency>