Mercurial > repos > iuc > varscan_somatic

changeset 8:485ea638e0ca draft

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"planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 46018cbdd8b4ca124d5c6230862012b9081d56e4"
author iuc
date Sat, 18 Jan 2020 08:17:56 +0000
parents 2ea345eef4e2
children 94979e9269f9
files varscan_somatic.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/varscan_somatic.xml	Fri Aug 16 15:48:18 2019 -0400
+++ b/varscan_somatic.xml	Sat Jan 18 08:17:56 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="varscan_somatic" name="VarScan somatic" version="@VERSION@.5">
+<tool id="varscan_somatic" name="VarScan somatic" version="@VERSION@.6">
     <description>Call germline/somatic and LOH variants from tumor-normal sample pairs</description>
     <macros>
         <import>macros.xml</import>
@@ -410,7 +410,7 @@
             </conditional>
             <assert_stderr>
                 <has_line_matching
-                expression=" Min coverage:&#09;2x for Normal, 2x for Tumor" />
+                expression=" *Min coverage:&#09;2x for Normal, 2x for Tumor" />
                 <has_line_matching
                 expression="Min reads2:&#09;1" />
                 <has_line_matching