Mercurial > repos > iuc > usher_matutils
view test-data/test_26_recombination.tabular @ 2:daa704d3ac8f draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/usher commit d44fdcd836306a2096d50bebb28d8faacdb0fbfd
| author | iuc |
|---|---|
| date | Mon, 02 Feb 2026 14:37:36 +0000 |
| parents | |
| children |
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#recomb_node_id breakpoint-1_interval breakpoint-2_interval donor_node_id donor_is_sibling donor_parsimony acceptor_node_id acceptor_is_sibling acceptor_parsimony original_parsimony min_starting_parsimony recomb_parsimony node_654 (0,241) (14408,19839) node_191 n 9 node_429 n 3 7 3 3 node_654 (0,14408) (19839,29784) node_429 n 3 node_427 n 4 7 3 3 node_654 (0,14408) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (0,14408) (23403,29784) node_429 n 3 node_427 n 4 7 3 3 node_654 (241,14408) (28882,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (1059,3037) (15933,19839) node_108 n 10 node_429 n 3 7 3 3 node_654 (3037,14408) (28883,29784) node_429 n 3 node_191 n 9 7 3 3 node_654 (3037,14408) (16968,19839) node_108 n 10 node_429 n 3 7 3 3 node_654 (15933,15933) (28883,29784) node_429 n 3 node_191 n 9 7 3 3 node_654 (15933,15933) (28882,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (15933,15933) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (15933,15933) (23403,29784) node_429 n 3 node_427 n 4 7 3 3 node_654 (15933,15933) (19839,29784) node_429 n 3 node_427 n 4 7 3 3 node_654 (16968,19839) (28883,29784) node_429 n 3 node_191 n 9 7 3 3 node_654 (16968,19839) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (16968,19839) (28882,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (16968,16968) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 node_654 (16968,16968) (23403,29784) node_429 n 3 node_427 n 4 7 3 3 node_654 (19839,23403) (28882,29784) node_427 n 4 node_429 n 3 7 3 3 node_654 (19839,23403) (28883,29784) node_427 n 4 node_429 n 3 7 3 3 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,241) (2516,10323) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (3037,3712) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (10323,22018) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (241,1059) (2597,10323) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (241,1059) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (3712,10323) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (3712,10323) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (5780,10323) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (5999,10323) node_1 n 24 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (7528,10323) node_1 n 24 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,10323) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,10323) (12878,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (11866,20268) node_73 n 17 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (13378,14408) node_1 n 24 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (14408,20268) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (14408,20268) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,13378) (15452,20268) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (19164,20268) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,13378) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,13378) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (21974,22018) node_275 n 19 node_135 y 15 19 15 14 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,22018) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,21974) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,22018) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,22018) (24349,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,21974) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,21974) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (22018,23403) (25563,27964) node_108 n 19 node_135 y 15 19 15 15 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (22917,23403) (28272,29362) node_135 y 15 node_133 n 17 19 15 16 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (24349,24349) (28272,29362) node_135 y 15 node_133 n 17 19 15 16 England/LIVE-DAB556/2020|20-10-18 (174,241) (3037,25546) node_108 n 3 node_133 n 3 7 3 2 England/LIVE-DAB556/2020|20-10-18 (174,241) (14408,25546) node_108 n 3 node_133 n 3 7 3 2 England/LIVE-DAB556/2020|20-10-18 (174,1059) (23403,25546) node_108 n 3 node_133 n 3 7 3 2 England/LIVE-DAB556/2020|20-10-18 (241,1059) (14408,27964) node_108 n 3 node_133 n 3 7 3 2 England/LIVE-DAB556/2020|20-10-18 (1059,3037) (23403,27964) node_108 n 3 node_133 n 3 7 3 2 England/LIVE-DAB556/2020|20-10-18 (3037,14408) (25546,27964) node_108 n 3 node_133 n 3 7 3 2