Mercurial > repos > iuc > usher_matutils
comparison test-data/test_26_recombination.tabular @ 2:daa704d3ac8f draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/usher commit d44fdcd836306a2096d50bebb28d8faacdb0fbfd
| author | iuc |
|---|---|
| date | Mon, 02 Feb 2026 14:37:36 +0000 |
| parents | |
| children |
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| 1:75e51e947a98 | 2:daa704d3ac8f |
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| 1 #recomb_node_id breakpoint-1_interval breakpoint-2_interval donor_node_id donor_is_sibling donor_parsimony acceptor_node_id acceptor_is_sibling acceptor_parsimony original_parsimony min_starting_parsimony recomb_parsimony | |
| 2 node_654 (0,241) (14408,19839) node_191 n 9 node_429 n 3 7 3 3 | |
| 3 node_654 (0,14408) (19839,29784) node_429 n 3 node_427 n 4 7 3 3 | |
| 4 node_654 (0,14408) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 5 node_654 (0,14408) (23403,29784) node_429 n 3 node_427 n 4 7 3 3 | |
| 6 node_654 (241,14408) (28882,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 7 node_654 (1059,3037) (15933,19839) node_108 n 10 node_429 n 3 7 3 3 | |
| 8 node_654 (3037,14408) (28883,29784) node_429 n 3 node_191 n 9 7 3 3 | |
| 9 node_654 (3037,14408) (16968,19839) node_108 n 10 node_429 n 3 7 3 3 | |
| 10 node_654 (15933,15933) (28883,29784) node_429 n 3 node_191 n 9 7 3 3 | |
| 11 node_654 (15933,15933) (28882,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 12 node_654 (15933,15933) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 13 node_654 (15933,15933) (23403,29784) node_429 n 3 node_427 n 4 7 3 3 | |
| 14 node_654 (15933,15933) (19839,29784) node_429 n 3 node_427 n 4 7 3 3 | |
| 15 node_654 (16968,19839) (28883,29784) node_429 n 3 node_191 n 9 7 3 3 | |
| 16 node_654 (16968,19839) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 17 node_654 (16968,19839) (28882,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 18 node_654 (16968,16968) (28881,29784) node_429 n 3 node_426 n 5 7 3 3 | |
| 19 node_654 (16968,16968) (23403,29784) node_429 n 3 node_427 n 4 7 3 3 | |
| 20 node_654 (19839,23403) (28882,29784) node_427 n 4 node_429 n 3 7 3 3 | |
| 21 node_654 (19839,23403) (28883,29784) node_427 n 4 node_429 n 3 7 3 3 | |
| 22 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,241) (2516,10323) node_108 n 19 node_135 y 15 19 15 15 | |
| 23 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (3037,3712) node_108 n 19 node_135 y 15 19 15 15 | |
| 24 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 25 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 26 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 27 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (0,1059) (10323,22018) node_73 n 17 node_135 y 15 19 15 14 | |
| 28 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (241,1059) (2597,10323) node_108 n 19 node_135 y 15 19 15 15 | |
| 29 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (241,1059) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 30 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 31 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 32 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 33 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 34 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (3712,10323) node_108 n 19 node_135 y 15 19 15 15 | |
| 35 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 36 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 37 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2516,2516) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 38 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 39 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 40 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 41 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (3712,10323) node_108 n 19 node_135 y 15 19 15 15 | |
| 42 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 43 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 44 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 45 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (5780,10323) node_108 n 19 node_135 y 15 19 15 15 | |
| 46 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 47 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 48 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 49 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,3037) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 50 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (2597,2597) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 51 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 52 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 53 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 54 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (5999,10323) node_1 n 24 node_135 y 15 19 15 15 | |
| 55 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 56 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 57 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 58 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (3712,3712) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 59 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 60 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (7528,10323) node_1 n 24 node_135 y 15 19 15 15 | |
| 61 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 62 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 63 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 64 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 65 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 66 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5780,5780) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 67 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 68 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 69 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 70 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 71 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (10323,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 72 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 73 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (5999,5999) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 74 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,10323) (14408,15452) node_73 n 17 node_135 y 15 19 15 14 | |
| 75 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 76 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 77 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 78 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,10323) (12878,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 79 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 80 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (11866,20268) node_73 n 17 node_135 y 15 19 15 14 | |
| 81 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (7528,7528) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 82 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 83 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 84 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 85 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 86 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (10323,10323) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 87 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 88 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (13378,14408) node_1 n 24 node_135 y 15 19 15 15 | |
| 89 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (14408,20268) node_108 n 19 node_135 y 15 19 15 15 | |
| 90 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 91 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 92 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 93 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (11866,11866) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 94 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 95 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (14408,20268) node_108 n 19 node_135 y 15 19 15 15 | |
| 96 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 97 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 98 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 99 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (12878,12878) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 100 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,13378) (15452,20268) node_108 n 19 node_135 y 15 19 15 15 | |
| 101 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (19164,20268) node_108 n 19 node_135 y 15 19 15 15 | |
| 102 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 103 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 104 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 105 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,13378) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 106 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 107 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,14408) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 108 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (13378,13378) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 109 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (20268,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 110 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 111 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 112 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 113 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (15452,15452) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 114 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (21974,22018) node_275 n 19 node_135 y 15 19 15 14 | |
| 115 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 116 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 117 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 118 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (19164,19164) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 119 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (22018,22917) node_135 y 15 node_133 n 17 19 15 16 | |
| 120 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 121 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 122 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (20268,20268) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 123 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,22018) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 124 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,21974) (23403,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 125 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,22018) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 126 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,22018) (24349,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 127 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,21974) (28272,29362) node_135 y 15 node_133 n 17 19 15 15 | |
| 128 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (21974,21974) (25563,26681) node_135 y 15 node_133 n 17 19 15 16 | |
| 129 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (22018,23403) (25563,27964) node_108 n 19 node_135 y 15 19 15 15 | |
| 130 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (22917,23403) (28272,29362) node_135 y 15 node_133 n 17 19 15 16 | |
| 131 USA/CA-QDX-3684/2021|MW545275.1|21-01-08 (24349,24349) (28272,29362) node_135 y 15 node_133 n 17 19 15 16 | |
| 132 England/LIVE-DAB556/2020|20-10-18 (174,241) (3037,25546) node_108 n 3 node_133 n 3 7 3 2 | |
| 133 England/LIVE-DAB556/2020|20-10-18 (174,241) (14408,25546) node_108 n 3 node_133 n 3 7 3 2 | |
| 134 England/LIVE-DAB556/2020|20-10-18 (174,1059) (23403,25546) node_108 n 3 node_133 n 3 7 3 2 | |
| 135 England/LIVE-DAB556/2020|20-10-18 (241,1059) (14408,27964) node_108 n 3 node_133 n 3 7 3 2 | |
| 136 England/LIVE-DAB556/2020|20-10-18 (1059,3037) (23403,27964) node_108 n 3 node_133 n 3 7 3 2 | |
| 137 England/LIVE-DAB556/2020|20-10-18 (3037,14408) (25546,27964) node_108 n 3 node_133 n 3 7 3 2 |