Mercurial > repos > iuc > samtools_view

diff samtools_view.xml @ 12:b2821e450815 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_view commit c5ded4208dd70e88596ddc725795a2401773f02d"
author iuc
date Sat, 27 Nov 2021 12:30:31 +0000
parents 61d97dda5ece
children ef12d752aba9
line wrap: on
line diff
--- a/samtools_view.xml	Wed Oct 13 13:11:00 2021 +0000
+++ b/samtools_view.xml	Sat Nov 27 12:30:31 2021 +0000
@@ -4,9 +4,9 @@
         <import>macros.xml</import>
         <token name="@REF_DATA@">
             ## additional reference data
-            #if $reffa!=None:
-                -T '$reffa'
-                -t '$reffai'
+            #if $use_ref:
+                -T "\$reffa"
+                -t "\$reffai"
             #end if
         </token>
         <xml name="read_output_formatting">