Mercurial > repos > iuc > reprof
changeset 7:fb0936cf5bef draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/reprof commit db55deda35d1623ff48fbea7b3d0690a2cd9cd9f-dirty
| author | iuc |
|---|---|
| date | Tue, 08 Dec 2015 13:46:13 -0500 |
| parents | 3658e4d701fc |
| children | 83eee9f6b57d |
| files | reprof.py test-data/report.tsv tool_dependencies.xml |
| diffstat | 3 files changed, 10 insertions(+), 7 deletions(-) [+] |
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--- a/reprof.py Thu Dec 03 15:04:39 2015 -0500 +++ b/reprof.py Tue Dec 08 13:46:13 2015 -0500 @@ -89,7 +89,8 @@ classification = 'mixed' with open(path, 'a') as handle: - handle.write("{0}\t{1}\n".format(id, classification)) + handle.write('# id\t% alpha\t% beta\tclass\n') + handle.write('{0}\t{1:.2f}\t{2:.2f}\t{3}'.format(id, h, e, classification)) def main(fasta, modeldir): for record in SeqIO.parse(fasta, 'fasta'):
--- a/test-data/report.tsv Thu Dec 03 15:04:39 2015 -0500 +++ b/test-data/report.tsv Tue Dec 08 13:46:13 2015 -0500 @@ -1,2 +1,4 @@ -test all-alpha -test2 all-alpha +# id % alpha % beta class +test .87 .12 all-alpha +# id % alpha % beta class +test2 .87 .12 all-alpha
--- a/tool_dependencies.xml Thu Dec 03 15:04:39 2015 -0500 +++ b/tool_dependencies.xml Tue Dec 08 13:46:13 2015 -0500 @@ -1,16 +1,16 @@ <?xml version="1.0"?> <tool_dependency> <package name="python" version="2.7"> - <repository changeset_revision="d9a0f454d3fa" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="409e51c1c555" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="fann" version="2.2.0"> - <repository changeset_revision="0f570ce183a8" name="package_fann_2_2_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="d852e92140a7" name="package_fann_2_2_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="perl_ai_fann" version="0.10"> - <repository changeset_revision="2e39b7570b10" name="package_perl_ai_fann_0_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="dd1f41f4d15d" name="package_perl_ai_fann_0_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="reprof" version="1.0.1"> - <repository changeset_revision="a010d7eddc71" name="package_reprof_1_0_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="ed6b6b8299bb" name="package_reprof_1_0_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="biopython" version="1.66"> <repository changeset_revision="ef89610ae47c" name="package_biopython_1_66" owner="biopython" toolshed="https://testtoolshed.g2.bx.psu.edu" />