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diff raxml.xml @ 9:9dd2607a4ec6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raxml commit 6e1b47bf8f06b9d92b369c2f36e52f4fc451d39c
author iuc
date Thu, 21 Jul 2022 15:15:46 +0000
parents 0a94c20da2ce
children 655428a2e1e1
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line diff
--- a/raxml.xml	Wed Sep 01 08:19:07 2021 +0000
+++ b/raxml.xml	Thu Jul 21 15:15:46 2022 +0000
@@ -1,10 +1,14 @@
-<tool id="raxml" name="Phyogenetic reconstruction with RAxML" version="8.2.4+galaxy2">
+<tool id="raxml" name="Phyogenetic reconstruction with RAxML" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
     <description>- Maximum Likelihood based inference of large phylogenetic trees</description>
+    <macros>
+        <token name="@TOOL_VERSION@">8.2.4</token>
+        <token name="@VERSION_SUFFIX@">3</token>
+    </macros>
     <xrefs>
         <xref type="bio.tools">raxml</xref>
     </xrefs>
     <requirements>
-        <requirement type="package" version="8.2.4">raxml</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">raxml</requirement>
         <requirement type="package" version="3.6">python</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
@@ -469,7 +473,7 @@
                     <has_text_matching expression="Chicken" />
                 </assert_contents>
             </output>
-            <output name="parsimonyTreeReq" file="RAxML_parsimonyTree.galaxy.multi" ftype="nhx"/>
+            <output name="parsimonyTreeReq" file="RAxML_parsimonyTree.galaxy.multi" ftype="nhx" compare="re_match"/>
             <output name="bestTree" ftype="nhx">
                 <assert_contents>
                     <has_text_matching expression="Whale" />