Mercurial > repos > iuc > panta
diff panta.xml @ 3:1de68b7a1e3f draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/panta commit 6adea21f21f7445e92568579096b7c7ea4781e50
| author | iuc |
|---|---|
| date | Wed, 22 Oct 2025 15:47:16 +0000 |
| parents | 137d00a9a598 |
| children |
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--- a/panta.xml Mon Oct 13 07:59:25 2025 +0000 +++ b/panta.xml Wed Oct 22 15:47:16 2025 +0000 @@ -127,10 +127,10 @@ <data format="txt" name="summary_statistics" label="${tool.name} on ${on_string} : Summary Statistics" from_work_dir="out/summary_statistics.txt"/> <!--Alignment outputs --> - <data format="txt" name="core_gene_alignment" label="${tool.name} on ${on_string} : Core Gene Alignment" from_work_dir="out/core_gene_alignment.aln.gz"> + <data format="fasta" name="core_gene_alignment" label="${tool.name} on ${on_string} : Core Gene Alignment" from_work_dir="out/core_gene_alignment.aln.gz"> <filter> ['alignment'] != 'None' </filter> </data> - <data format="txt" name="pan_genome_reference" label="${tool.name} on ${on_string} : Pan Genome Reference" from_work_dir="out/pan_genome_reference.fna"> + <data format="fasta" name="pan_genome_reference" label="${tool.name} on ${on_string} : Pan Genome Reference" from_work_dir="out/pan_genome_reference.fna"> <filter> ['alignment'] != 'None' </filter> </data> </outputs> @@ -400,12 +400,12 @@ <has_n_lines n="6" delta='3'/> </assert_contents> </output> - <output name="core_gene_alignment" ftype="txt"> + <output name="core_gene_alignment" ftype="fasta"> <assert_contents> <has_n_lines n="96130" delta='3'/> </assert_contents> </output> - <output name="pan_genome_reference" ftype="txt"> + <output name="pan_genome_reference" ftype="fasta"> <assert_contents> <has_text text="AAAGGCGTTTGGTATATAACGATGCCAG"/> <has_n_lines n="84292" delta='3'/>