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author iuc
date Wed, 29 Apr 2015 22:45:55 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="trans_proteomic_pipeline" version="4.8.0">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/tpp/tpp-4.8.0-Linux-x86_64.tar.gz</action>
                    <action type="shell_command">rm tpp-4.8.0-Linux-x86_64.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>
                    <action type="set_environment">
                        <environment_variable action="set_to" name="TPP_ROOT_PATH">$INSTALL_DIR</environment_variable>
                        <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/</environment_variable>
                        <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable>
                    </action>
                </actions>
            </actions_group>
        </install>
        <readme>
            Installs and complils the trans proteomic pipeline in version 4.8.0.
            The Trans-Proteomic Pipeline (TPP) is a collection of integrated tools for MS/MS proteomics, developed at the SPC.

            http://tools.proteomecenter.org/

            TPP_ROOT_PATH will point to the root path of the installation.
        </readme>
    </package>
</tool_dependency>