Mercurial > repos > iuc > package_tpp_4_7_0

diff tool_dependencies.xml @ 10:a5d93ac27cfe draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_tpp_4_7_0 commit 97a064489364118d108b0dd2cfb4d9bc53080837
author iuc
date Thu, 19 Nov 2015 14:42:35 -0500
parents 5d695df7cfa1
children 9f606e975d00
line wrap: on
line diff
--- a/tool_dependencies.xml	Sat Oct 10 08:22:07 2015 -0400
+++ b/tool_dependencies.xml	Thu Nov 19 14:42:35 2015 -0500
@@ -10,13 +10,13 @@
         <repository changeset_revision="8fc96166cddd" name="package_expat_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="bzlib" version="1.0.6">
-        <repository changeset_revision="7ebd16eeff6b" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="29f79feefc77" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="libpng" version="1.2.5">
         <repository changeset_revision="8813649bf702" name="package_libpng_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="boost" version="1.55.0">
-        <repository changeset_revision="8bf1336e52a1" name="package_boost_1_55" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="214c7835ee91" name="package_boost_1_55" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="e2fsprogs" version="1.42.9">
         <repository changeset_revision="13445e8c7fd8" name="package_e2fsprogs_1_42_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
@@ -50,10 +50,10 @@
                     <repository changeset_revision="8813649bf702" name="package_libpng_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="libpng" version="1.2.5" />
                     </repository>
-                    <repository changeset_revision="7ebd16eeff6b" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="29f79feefc77" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="bzlib" version="1.0.6" />
                     </repository>
-                    <repository changeset_revision="8bf1336e52a1" name="package_boost_1_55" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="214c7835ee91" name="package_boost_1_55" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="boost" version="1.55.0" />
                     </repository>
                     <repository changeset_revision="8fc96166cddd" name="package_expat_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
@@ -111,9 +111,7 @@
                 <action type="shell_command">sed -i.bak -e 's/qw(.*) /(&amp;) /' ../CGI/show_nspbin.pl</action>
                 <action type="shell_command">sed -i.bak -e 's/qw(.*) /(&amp;) /' ../perl/exporTPP.pl</action>
                 <action type="shell_command">echo '' &gt; ../perl/tpp_models.pl</action>
-
-                <action type="shell_command">make</action>
-                <action type="shell_command">make install</action>
+                <action type="make_install" />
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/tpp/bin</environment_variable>
                     <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib/perl5</environment_variable>