annotate tool_dependencies.xml @ 0:09145f96007c draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
author iuc
date Thu, 12 Nov 2015 02:52:38 -0500
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children b35a64ef1cde
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09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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1 <?xml version="1.0"?>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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2 <tool_dependency>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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3 <package name="bz2file" version="0.98">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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4 <repository changeset_revision="f504007348bb" name="package_bz2file_0_98" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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5 </package>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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6 <package name="screed" version="0.9">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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7 <install version="1.0">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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8 <actions>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
iuc
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9 <action md5sum="611dd11105489e4153265e055f13debd" type="download_by_url">https://pypi.python.org/packages/source/s/screed/screed-0.9.tar.gz</action>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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10 <action type="set_environment_for_install">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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11 <repository changeset_revision="f504007348bb" name="package_bz2file_0_98" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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12 <package name="bz2file" version="0.98" />
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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13 </repository>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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14 </action>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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15 <action type="shell_command">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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16 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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17 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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18 </action>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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19 <action type="set_environment">
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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20 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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21 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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22 </action>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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23 </actions>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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24 </install>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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25 <readme>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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26 Downloads and installs screed.
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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27 </readme>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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28 </package>
09145f96007c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_screed_0_9 commit be26d5871e25cedbc642669993e64439715c7a24
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29 </tool_dependency>