changeset 6:c75e2f0a9fb6 draft

Uploaded
author iuc
date Wed, 11 Feb 2015 11:04:52 -0500
parents a983dc7c8103
children 75bed484c53c
files tool_dependencies.xml
diffstat 1 files changed, 10 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Aug 07 11:28:08 2014 -0400
+++ b/tool_dependencies.xml	Wed Feb 11 11:04:52 2015 -0500
@@ -1,5 +1,8 @@
 <?xml version="1.0"?>
 <tool_dependency>
+        <package name="atlas" version="3.10.2">
+            <repository changeset_revision="d5b1c7875b7b" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        </package>
         <package name="numpy" version="1.7.1">
             <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
         </package>
@@ -8,17 +11,18 @@
                 <actions>
                     <action type="download_by_url">http://downloads.sourceforge.net/project/scipy/scipy/0.12.0/scipy-0.12.0.tar.gz</action>
                     <action type="set_environment_for_install">
+                        <repository changeset_revision="d5b1c7875b7b" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                            <package name="atlas" version="3.10.2" />
+                        </repository>
                         <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                             <package name="numpy" version="1.7.1" />
                         </repository>
                     </action>
                     <action type="make_directory">$INSTALL_DIR/lib/python</action>
-                    <action language="cheetah" type="template_command">
-                    export PYTHONPATH=\$PYTHONPATH:$env.INSTALL_DIR/lib/python &amp;&amp; 
-
-                    export PATH=\$PATH:$env.PATH_NUMPY &amp;&amp; 
-                    export PYTHONPATH=\$PYTHONPATH:$env.PYTHONPATH_NUMPY &amp;&amp; 
-                    python setup.py install --install-lib $env.INSTALL_DIR/lib/python --install-scripts $env.INSTALL_DIR/bin
+                    <action type="shell_command">
+                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
+                        export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
+                        python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                     </action>
                     <action type="set_environment">
                         <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>