Mercurial > repos > iuc > package_python_2_7_scikit_learn_0_15

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_scikit_learn_0_15 commit 95448f317f066962d05ee90bc78040335a32d6a0
author iuc
date Tue, 26 May 2015 22:39:01 -0400
parents f0867475e3cc
children 6aa40f16a9ab
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="python" version="2.7">
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4 <repository changeset_revision="c7042bd0bb22" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="numpy" version="1.9">
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7 <repository changeset_revision="75990fbcd389" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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9 <package name="scipy" version="0.14">
10
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10 <repository changeset_revision="eaf37c2ff694" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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11 </package>
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12 <package name="matplotlib" version="1.4">
10
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13 <repository changeset_revision="5489e5383593" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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14 </package>
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15 <package name="scikit_learn" version="0.15">
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16 <install version="1.0">
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17 <actions>
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18 <action type="setup_python_environment">
9
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19 <repository changeset_revision="c7042bd0bb22" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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20 <package name="python" version="2.7" />
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21 </repository>
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22 <repository changeset_revision="75990fbcd389" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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23 <package name="numpy" version="1.9" />
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24 </repository>
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25 <repository changeset_revision="eaf37c2ff694" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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26 <package name="scipy" version="0.14" />
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27 </repository>
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28 <repository changeset_revision="5489e5383593" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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29 <package name="matplotlib" version="1.4" />
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30 </repository>
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31 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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32 <package>https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5=d9822ad0238e17b382a3c756ea94fe0d</package>
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33 </action>
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35 <action type="set_environment">
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36 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
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37 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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38 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
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39 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
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40 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
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41 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable>
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42 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
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43 <environment_variable action="set_to" name="PYTHONPATH_SCIKIT_LEARN">$INSTALL_DIR</environment_variable>
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44 </action>
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45 </actions>
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46 </install>
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47 <readme>
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48 Compiling scikit-learn requires a C compiler (typically gcc).
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49 The PYTHONPATH for scikit-learn can be accessed through PYTHONPATH_SCIKIT_LEARN.
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50
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51 Wrapper development: https://github.com/bgruening/galaxytools/tree/master/orphan_tool_dependencies
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52 </readme>
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53 </package>
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54 </tool_dependency>