Mercurial > repos > iuc > package_python_2_7_numpy_1_9

annotate tool_dependencies.xml @ 21:88d3bc8da3d9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit f6ee6a549b9c121ee69914a2fdde392de74e4b19
author iuc
date Wed, 02 Dec 2015 16:24:46 -0500
parents db045339112b
children 3f5ed97e31de
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a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="atlas" version="3.10.2">
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4 <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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5 </package>
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6 <package name="python" version="2.7.10">
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7 <repository changeset_revision="59d69069d35d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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8 </package>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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9 <package name="numpy" version="1.9">
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10 <install version="1.0">
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11 <actions>
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12 <action type="setup_python_environment">
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13 <repository changeset_revision="59d69069d35d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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14 <package name="python" version="2.7.10" />
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15 </repository>
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16 <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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17 <package name="atlas" version="3.10.2" />
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18 </repository>
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19 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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20 <package md5sum="a1ed53432dbcd256398898d35bc8e645">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.2.tar.gz</package>
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21 </action>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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22 <action type="set_environment">
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23 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
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24 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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25 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable>
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26 <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR</environment_variable>
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27 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]/atlas</environment_variable>
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28 <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable>
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29 <environment_variable action="set_to" name="NUMPY_ROOT_DIR">$INSTALL_DIR</environment_variable>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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30 </action>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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31 </actions>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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32 </install>
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33 <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme>
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34 </package>
a095a5975d3a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_numpy_1_9 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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35 </tool_dependency>