Mercurial > repos > iuc > package_python_2_7_deeptools_1_5_10

annotate tool_dependencies.xml @ 25:1307a2c94f33 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 4c44b550f39ec90756c7bf5277fa1341de767bfd-dirty
author iuc
date Thu, 03 Sep 2015 03:48:46 -0400
parents 468e17842948
children 1ad257317ed0
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
6a8a27d4992b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
6a8a27d4992b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
iuc
parents:
diff changeset
2 <tool_dependency>
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
3 <package name="samtools" version="0.1.19">
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
4 <repository changeset_revision="786e3000ca58" name="package_samtools_0_1_19" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
5 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
6 <package name="numpy" version="1.9">
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
7 <repository changeset_revision="507f3ab4e38d" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
8 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
9 <package name="matplotlib" version="1.4">
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
10 <repository changeset_revision="74bd884bc018" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
11 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
12 <package name="scipy" version="0.14">
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
13 <repository changeset_revision="145ba5a36683" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
14 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
15 <package name="pysam" version="0.8.3">
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
16 <repository changeset_revision="d2615d52baee" name="package_python_2_7_pysam_0_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
17 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
18 <package name="bx-python" version="0.7.2">
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
19 <repository changeset_revision="cd7bec234cb5" name="package_python_2_7_bx_python_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
20 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
21 <package name="ucsc_tools" version="0.1">
24
468e17842948 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 22168811c93658ecf0613c985ec8d16e1ab00ff9
iuc
parents: 23
diff changeset
22 <repository changeset_revision="d31e73183b94" name="package_ucsc_tools_0_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
23 </package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
24 <package name="python" version="2.7">
25
1307a2c94f33 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 4c44b550f39ec90756c7bf5277fa1341de767bfd-dirty
iuc
parents: 24
diff changeset
25 <repository changeset_revision="17b9d79ae892" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
26 </package>
11
9cf7e341af5d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit ab1ab06323702186cf0c883d5774720cbb822cb5-dirty
iuc
parents: 10
diff changeset
27 <package name="deepTools" version="1.5.10">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
28 <install version="1.0">
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
29 <actions>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
30 <action type="setup_python_environment">
25
1307a2c94f33 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 4c44b550f39ec90756c7bf5277fa1341de767bfd-dirty
iuc
parents: 24
diff changeset
31 <repository changeset_revision="17b9d79ae892" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
19
74c7e13473ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 124516bc2aab56c243be3cf15e4282d59390970b
iuc
parents: 18
diff changeset
32 <package name="python" version="2.7" />
74c7e13473ed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 124516bc2aab56c243be3cf15e4282d59390970b
iuc
parents: 18
diff changeset
33 </repository>
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
34 <repository changeset_revision="d2615d52baee" name="package_python_2_7_pysam_0_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
35 <package name="pysam" version="0.8.3" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
36 </repository>
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
37 <repository changeset_revision="cd7bec234cb5" name="package_python_2_7_bx_python_0_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
38 <package name="bx-python" version="0.7.2" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
39 </repository>
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
40 <repository changeset_revision="507f3ab4e38d" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
41 <package name="numpy" version="1.9" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
42 </repository>
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
43 <repository changeset_revision="74bd884bc018" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
44 <package name="matplotlib" version="1.4" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
45 </repository>
23
f5f606557e05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
iuc
parents: 22
diff changeset
46 <repository changeset_revision="145ba5a36683" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
47 <package name="scipy" version="0.14" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
48 </repository>
15
b8ad74dcbfc1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit a29c5bfb94dbbda9939130326fc42fea1a6a20ff-dirty
galaxyp
parents: 14
diff changeset
49 <repository changeset_revision="786e3000ca58" name="package_samtools_0_1_19" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
50 <package name="samtools" version="0.1.19" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
51 </repository>
24
468e17842948 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 22168811c93658ecf0613c985ec8d16e1ab00ff9
iuc
parents: 23
diff changeset
52 <repository changeset_revision="d31e73183b94" name="package_ucsc_tools_0_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
53 <package name="ucsc_tools" version="0.1" />
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
54 </repository>
25
1307a2c94f33 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 4c44b550f39ec90756c7bf5277fa1341de767bfd-dirty
iuc
parents: 24
diff changeset
55 <package>https://pypi.python.org/packages/source/m/mock/mock-1.3.0.tar.gz#md5=73ee8a4afb3ff4da1b4afa287f39fdeb</package>
12
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
56 <package>https://github.com/fidelram/deepTools/archive/1.5.10.tar.gz</package>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
57 </action>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
58
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
59 <action type="set_environment">
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
60 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
61 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
62 <environment_variable action="set_to" name="DEEPTOOLS_ROOT_PATH">$INSTALL_DIR</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
63 <environment_variable action="set_to" name="DEEPTOOLS_PYTHONPATH">$INSTALL_DIR</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
64 <environment_variable action="set_to" name="DEEPTOOLS_PATH">$INSTALL_DIR/bin</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
65 <!-- include samtools into PATH -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
66 <environment_variable action="prepend_to" name="PATH">$ENV[BAM_ROOT]/bin</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
67 <!-- include numpy -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
68 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
69 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
70 <!-- include matplotlib -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
71 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
72 <!-- include scipy -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
73 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
74 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
75 <!-- include bx-python -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
76 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_BX_PYTHON]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
77 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_BX_PYTHON]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
78 <!-- include pysam -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
79 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_PYSAM]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
80 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_PYSAM]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
81 <!-- include ucsc tools -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
82 <environment_variable action="prepend_to" name="PATH">$ENV[UCSC_TOOLS_ROOT_PATH]</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
83 <!-- disable the config file of deepTools -->
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
84 <environment_variable action="set_to" name="DEEP_TOOLS_NO_CONFIG">TRUE</environment_variable>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
85 </action>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
86 </actions>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
87 </install>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
88 <readme>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
89 Installation of deepTools from Fidel Ramirez.
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
90 https://github.com/fidelram/deepTools
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
91 </readme>
41de4f005517 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66
iuc
parents: 11
diff changeset
92 </package>
0
6a8a27d4992b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_deeptools_1_5_10 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
iuc
parents:
diff changeset
93 </tool_dependency>