Mercurial > repos > iuc > package_python_2_7_bx_python_0_7

annotate tool_dependencies.xml @ 14:6886cfd02055 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 543b8d28d5f84f5b8ac31b3aa05f68a7b4094d66-dirty
author iuc
date Mon, 25 May 2015 09:02:57 -0400
parents 1d8ff5734d62
children 803869096ef4
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2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="numpy" version="1.9">
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4 <repository changeset_revision="e5dd107dace7" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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5 </package>
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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6 <package name="python" version="2.7">
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7 <repository changeset_revision="00d2c3e43807" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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8 </package>
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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9 <package name="bx-python" version="0.7.2">
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10 <install version="1.0">
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11 <actions>
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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12 <action type="setup_python_environment">
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13 <repository changeset_revision="00d2c3e43807" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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14 <package name="python" version="2.7" />
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15 </repository>
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16 <repository changeset_revision="e5dd107dace7" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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17 <package name="numpy" version="1.9" />
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18 </repository>
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19 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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20 <package>https://pypi.python.org/packages/source/d/distribute/distribute-0.6.49.tar.gz</package>
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21 <package>https://pypi.python.org/packages/source/b/bx-python/bx-python-0.7.2.tar.gz</package>
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2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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22 </action>
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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23 <action type="set_environment">
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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24 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
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25 <environment_variable action="prepend_to" name="PYTHONPATH_BX_PYTHON">$INSTALL_DIR</environment_variable>
2ac1c3874d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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26 <environment_variable action="prepend_to" name="PATH_BX_PYTHON">$INSTALL_DIR/bin</environment_variable>
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27 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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28 <environment_variable action="set_to" name="BX_PYTHON_ROOT_DIR">$INSTALL_DIR</environment_variable>
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29 </action>
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30 </actions>
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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31 </install>
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32 <readme>
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33 Installation of bx-python. The installation can be accessed via BX_PYTHON_PATH.
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34 </readme>
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35 </package>
2ded28a666c7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bx_python_0_7 commit 5a986267144da2093f820e1833325fd3d5902c7d-dirty
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36 </tool_dependency>