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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="pysam" version="0.7.7">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">https://pypi.python.org/packages/source/p/pysam/pysam-0.7.7.tar.gz</action>
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7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
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8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
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9 <action type="set_environment">
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10 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
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11 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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12 <environment_variable action="set_to" name="PYSAM_PATH">$INSTALL_DIR</environment_variable>
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13 </action>
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14 </actions>
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15 </install>
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16 <readme>
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17 Installation of pysam, pyrex and python are required. The installation can be accessed via PYSAM_PATH.
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18 </readme>
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19 </package>
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20 </tool_dependency>
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