comparison tool_dependencies.xml @ 4:c3ebeaf31d1d draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_psort_3_0_3 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
author iuc
date Tue, 22 Dec 2015 19:29:06 -0500
parents b847990dc2fa
children
comparison
equal deleted inserted replaced
3:b847990dc2fa 4:c3ebeaf31d1d
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="perl" version="5.18.1"> 3 <package name="perl" version="5.18.1">
4 <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="d5193a5f6203" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="legacy_blast" version="2.2.6"> 6 <package name="legacy_blast" version="2.2.6">
7 <repository changeset_revision="f55a0c6d1484" name="package_legacy_blast_2_2_6" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="f55a0c6d1484" name="package_legacy_blast_2_2_6" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 9
33 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/pft</environment_variable> 33 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/pft</environment_variable>
34 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable> 34 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
35 </action> 35 </action>
36 36
37 <action type="setup_perl_environment"> 37 <action type="setup_perl_environment">
38 <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 38 <repository changeset_revision="d5193a5f6203" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
39 <package name="perl" version="5.18.1" /> 39 <package name="perl" version="5.18.1" />
40 </repository> 40 </repository>
41 <!-- allow downloading and installing an Perl package from cpan.org--> 41 <!-- allow downloading and installing an Perl package from cpan.org-->
42 <package>http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.922.tar.gz</package> 42 <package>http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.922.tar.gz</package>
43 <package>http://www.psort.org/download/bio-tools-psort-all.3.0.3.tar.gz</package> 43 <package>http://www.psort.org/download/bio-tools-psort-all.3.0.3.tar.gz</package>