Mercurial > repos > iuc > package_gmap_2016_09_23

comparison tool_dependencies.xml @ 0:78dcc4213e07 draft

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Uploaded initial version, based on JJ's package_gmap_2013_05_09
author iuc
date Tue, 25 Oct 2016 05:22:46 -0400
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children cddc18d238f7
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-1:000000000000 0:78dcc4213e07
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="gmap" version="2016-09-23">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url" target_filename="gmap-2016-09-23.tar.gz" sha256sum="dbb99cab7ee675bdc79d6773d7537b197812e73151c5dafa1fbc8f9c0c58ef93">http://research-pub.gene.com/gmap/src/gmap-gsnap-2016-09-23.tar.gz</action>
7 <action type="shell_command"> ./configure --prefix=$INSTALL_DIR --with-gmapdb=$INSTALL_DIR/gmapdb</action>
8 <action type="shell_command">make</action>
9 <action type="shell_command">make install</action>
10 <action type="set_environment">
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
12 </action>
13 </actions>
14 </install>
15 <readme>
16 </readme>
17 </package>
18 </tool_dependency>